Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq7728 123 6e-23 seq3514 118 3e-21 seq6623 100 7e-16 seq4510 98.7 2e-15 >seq7728 Length=1087 Score = 123 bits (136), Expect = 6e-23 Identities = 160/221 (72%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 || || | ||| || ||||| | ||||| || || || | ||||| || | | || Sbjct 268 CGCAGGCGCAGAACCAGGTGCAATGTGGACTCCTTCTGAATGTTGTAGTCCGAAAGCGTG 209 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 | || || || |||||||| || || ||||| || || || || || || || || ||| Sbjct 208 CGGCCGTCCTCCAGCTGCTTGCCCGCAAAGATGAGGCGCTGCTGATCAGGGGGGATCCCT 149 Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672 |||||||| |||||||||||||||||| ||||| ||||| || || || |||| Sbjct 148 TCCTTGTCCTGGATCTTTTGCTTCACATTCTCGATTGTGTCGCTGGGCTCAACATCTAGG 89 Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| ||||||||||||| || || | ||| | ||||| Sbjct 88 GTGATGGTCTTGCCCGTCAGGGTCTTGACGAAGATCTGCAT 48 >seq3514 Length=4596 Score = 118 bits (130), Expect = 3e-21 Identities = 191/275 (69%), Gaps = 0/275 (0%) Strand=Plus/Minus Query 7447 TATTTAATATTTGGTGGCTTTTCTGGTATTATAGGTACTATATTTTCTATGATTATAAGG 7506 ||||| || |||| | ||||||||| || |||| ||| ||||| | || | Sbjct 2299 TATTTGATTTTTGCGGCTTTTTCTGGTGTTTTAGGAACTGCGTTTTCGGCACTAATTCGT 2240 Query 7507 TTAGAATTAGCTGCTCCGGGTTCTCAAATATTGAGTGGTAATAGCCAACTTTACAACGTT 7566 || |||||||| || || ||||| | |||| || ||| | || |||||| Sbjct 2239 TTGGAATTAGCACAACCTGGAAACCAAATTCTAGGTGGAAACCATCAATTATATAACGTT 2180 Query 7567 ATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTATGATAGGC 7626 || ||||| || || |||||| | ||| |||| | ||| || ||||| | | | || || Sbjct 2179 ATAATTACAGCACACGCCTTTCTAATGGTTTTTTATTTAGTGATGCCTGCTCTAATGGGT 2120 Query 7627 GGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCTTTTCCAAGG 7686 ||||| || ||||| || | ||| | | |||||||| ||||||||||| || ||| | Sbjct 2119 GGTTTTGGTAATTGGTTTCTACCTATTTTAATTGGTGCACCTGATATGGCATTCCCACGT 2060 Query 7687 CTTAACAATATAAGTTTTTGATTACTACCGCCTTC 7721 | ||||| || || || || ||| |||| ||||| Sbjct 2059 TTAAACAACATTAGCTTCTGGTTATTACCCCCTTC 2025 Score = 98.7 bits (108), Expect = 2e-15 Identities = 112/148 (76%), Gaps = 2/148 (1%) Strand=Plus/Plus Query 371365 AATGGTAATTTATGCATAGATAAACCAGGTACTCTCATATTAAATATCGTAGTAATAAAG 371424 || |||||| |||||||| | |||||| |||||||||| || | ||||||||||| Sbjct 360 AAAGGTAATCTATGCATACTCATACCAGGAGCTCTCATATTGAACACAGTAGTAATAAAA 419 Query 371425 TTTATAGCGCCTAGAAGAGAAGATA-TACCTGCAAGATGTAAACTAAATATTGCTAAATC 371483 || ||||| || | || | | || ||| ||||| ||||||||||| ||||| || || Sbjct 420 TTAATAGCACCCATAATA-CTGCTAGCACCAGCAAGGTGTAAACTAAAAATTGCCAAGTC 478 Query 371484 GACGGAACCGCCGGAGTGAGCTACAATA 371511 || ||||| || |||||| | ||||| Sbjct 479 TACTGAACCACCAGAGTGACTTGCAATA 506 >seq6623 Length=1529 Score = 100 bits (110), Expect = 7e-16 Identities = 99/127 (78%), Gaps = 1/127 (1%) Strand=Plus/Plus Query 7736 TGGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGCTTATACAATCTT 7795 ||||||| ||||| ||||| ||| ||||||||||||| ||||||||||| | | | Sbjct 1250 TGGTAAGGTTCTTCGCGTTGCATCGAATTAAACCACATGCTCCACCGCTTGTGCGGGCCC 1309 Query 7796 CCGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGGAATA-TTTACGC 7854 |||||| || |||||||||| | |||||| | || | | |||| || ||| || |||| Sbjct 1310 CCGTCAATTCCTTTGAGTTTCACTCTTGCGAGCATACTCCCCAGGCGGGATACTTCACGC 1369 Query 7855 GTTAGCT 7861 ||||||| Sbjct 1370 GTTAGCT 1376 >seq4510 Length=3231 Score = 98.7 bits (108), Expect = 2e-15 Identities = 84/104 (81%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 4471 AATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACCT 4530 || || ||||||||||| || || || || |||||||| |||||||| ||||| || ||| Sbjct 659 AAAATCTGACCATCAGTGATTGAAATCACGTTTGTAGGAATATAAGCTGAAACGTCTCCT 718 Query 4531 GCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCACC 4574 ||||| ||||| | |||||| | ||||||| ||| ||||| || Sbjct 719 GCTTGAGTTTCAATAACAGGAAGTGCTGTTAATGAACCACCGCC 762 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192408980831306