Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= NC_030696.1 Length=93139 Score E Sequences producing significant alignments: (Bits) Value seq5 163 2e-35 seq706 150 1e-31 seq2405 143 2e-29 >seq5 Length=148305 Score = 163 bits (180), Expect = 2e-35 Identities = 242/338 (72%), Gaps = 4/338 (1%) Strand=Plus/Minus Query 71940 CGACACCGTGATCACCGTGATCGGAAATCTGACCGCCGATCCCGAACTGCGCTTCACCCC 71999 ||| ||||| |||||||| | || || || || ||||| ||||| ||||| | ||| | Sbjct 31305 CGAGACCGTCATCACCGTCGTGGGCAACCTCACGGCCGACCCCGAGCTGCGGTACACGCA 31246 Query 72000 CT-CGGGCGCGCCGGTCGCCAACTTCACCGTCGCAAGCACCCCGCGGTACTTCGACAAGC 72058 ||||| ||| ||||| ||||||||| |||| ||||| || |||||| | Sbjct 31245 GAACGGGCT-GCCCGTCGCGAACTTCACCATCGCGTCGACCCCCCGCACGTTCGACCGTC 31187 Query 72059 AGTCCAACGAGTGGAAGGACGCCGAGGCGCTCTTCCTGCGCTGCAAC-ATCTGGCGCGAG 72117 || | |||||||||||||||| |||||| || |||||||| || | ||||||| ||| Sbjct 31186 AGGCGAACGAGTGGAAGGACGGCGAGGCCCTGTTCCTGCG-GGCGTCGGTCTGGCGTGAG 31128 Query 72118 CCGGCCGAGAACGTCACCGAGTCGCTGTCCAAGGGCATGCGCGTCATCGTCCAGGGTCGC 72177 |||||| |||| | | |||||| ||||||||| || ||||||| ||||| Sbjct 31127 TTCGCCGAGCACGTGGCGGGTTCGCTGACCAAGGGCAGCCGTGTCATCGCGACCGGTCGT 31068 Query 72178 CTCAAGCAGCGCAGCTACGAGACGAAGGAAGGCGAGAACCGGACGGTCATCGAGCTCGAG 72237 || |||||| |||| || || || ||| ||| || | |||||| |||||| Sbjct 31067 CTGCGTCAGCGCTCCTACCAGGACCGTGACGGGCAGACCCGCACCGCCATCGAACTCGAG 31008 Query 72238 GTCGAGGAGATCGGCCCCGCACTGCGGTACGCCACCGC 72275 || || ||||||||||| || || ||||| ||||| Sbjct 31007 GTGGACGAGATCGGCCCGAGCCTCCGCTACGCGACCGC 30970 >seq706 Length=18769 Score = 150 bits (166), Expect = 1e-31 Identities = 292/423 (69%), Gaps = 6/423 (1%) Strand=Plus/Plus Query 57505 GGCTTCATCGACTTCCTTGACCGGAACCGACACGGATCGCCGTTCGAGCACTCCGTCTTC 57564 ||| ||||| ||| ||| || |||| ||||| ||||||||||||||| | || Sbjct 2717 GGCCTCATCAACTACCTGATGCGCGACCGTCACGGCTCGCCGTTCGAGCACAACTCGCTC 2776 Query 57565 ACCTTCCTGGTCGAGTGCCCCATATTCGTTTCGCGTGAGTTCATGCGCCACCGAATCGCC 57624 |||||| || || ||||| ||||| | || ||||||||||||||||| ||||| Sbjct 2777 ACCTTCTACGTGCAGGCGCCCATCTTCGTGTTCCGCGAGTTCATGCGCCACCGCATCGCG 2836 Query 57625 TCGTACAACGAGGAATCCGGTCGATACAAGGTCATGAAGGGCGTGTTCTACGT-CCCGGC 57683 ||||||||||| || || || ||| | || ||||||||||| |||||| Sbjct 2837 AGCTACAACGAGGAGTCGGGCCGCTACCGCGAGCTGCGTCCGGTGTTCTACGTGCCCGGC 2896 Query 57684 CGACGACCGGCCGCTGGTCCAGGTGGGCAAGCCGGGTGAGTATCGA-TTCGAGGCCGGGA 57742 | ||| || ||| | ||||| |||||||| || | ||| ||| ||| |||| | Sbjct 2897 C-CCGAGCGCAACCTGCTGCAGGTCGGCAAGCCCGGCGCGTA-CGAGTTCCTCCCCGGCA 2954 Query 57743 CGCTCGAGCAGCACGAGCTGGTGACAGACCTGTTCCAGCTCGCCGCCGAT-ACCGGCTAC 57801 ||||||| || ||||||| | || | | | |||| |||| ||| || | Sbjct 2955 GCGACGAGCAGGTCGCGCTGGTGGCCGAGACGACTCGGGCCGCC-TCGATCGCCGCCTTC 3013 Query 57802 AACCTCTACCAGACCATGCTCGACGCCGGCATTGCCCGGGAAGTTGCGCGCGACGTCCTG 57861 | ||| ||| ||||||||| || ||| | ||||| || || |||||| ||| ||| Sbjct 3014 GAGGCCTATCAGCGCATGCTCGAGGCGGGCGTCGCCCGTGAGGTCGCGCGCATCGTGCTG 3073 Query 57862 CCGTTCCAGCTGTACACCTCGTTCTACGTCACCATGAACGCGCGCGGCCTGATGAACTTC 57921 ||| | | | ||| | ||| | ||||| || | ||||| ||| |||||||||||| Sbjct 3074 CCGCTGAACATCTACTCGTCGATGTACGTGACGGTCAACGCCCGCTCGCTGATGAACTTC 3133 Query 57922 CTC 57924 ||| Sbjct 3134 CTC 3136 >seq2405 Length=7261 Score = 143 bits (158), Expect = 2e-29 Identities = 301/438 (69%), Gaps = 8/438 (2%) Strand=Plus/Minus Query 42850 GCCGAGGGCCTCTTCCATCCACGCCACAAGCAGGCGCTCCCGCGTGTTCCGAAGTGCATC 42909 |||||||| | ||| | | || ||||| | |||| ||| | || || ||||| Sbjct 806 GCCGAGGGATTGTTCGACGCGTCCCGCAAGCGGCCGCTGCCGTTCCTGCCCCAGCGCATC 747 Query 42910 GGCCTGATCACCGCACCGAATAGCGACGCGGAGAAGGACGTGCTCAGCGTCGCGCGAGGA 42969 ||||| ||||||| | |||||| ||||||||||||||| || ||| |||| Sbjct 746 GGCCTCATCACCGGCGAGCGCTCCGACGCCGAGAAGGACGTGCTCCGCAACGC-CGAGCT 688 Query 42970 -CGGTGGTCGAGCGTCAGCTTCAAGCTGTCCCACAT-CAACG-TCCAGGGGCAGCGCTGC 43026 || ||| || |||| | ||| || ||| || || || | ||||| ||||| || Sbjct 687 GCGCTGGCCGGGCGTGCGGTTCC-GC-GTCGAGCACGCAGCGGTGCAGGGCGAGCGCAGC 630 Query 43027 GCCGGCGCGG-CGAAGCGAGCCATCGAGGAGTTCGACGCGGACCCGGGCGTGGACGTCAT 43085 | ||||| | || || ||| | ||| | ||||||| ||||||| ||| |||||||| Sbjct 629 GTCGGCGAGATCGTCGCC-GCCCTGGAGCTGCTCGACGCCGACCCGGACGTCGACGTCAT 571 Query 43086 CATCCTGGCCCGCGGCGGCGGCTCGAAGGAAGACCTCCTCCCGTGGTCCGACGAGGCTCT 43145 | || | ||||||||||||||| | |||| || | |||||| || Sbjct 570 CGTCATCGCCCGCGGCGGCGGCGACCCGCTGCACCTTCTGGGATTCAGCGACGAACGCCT 511 Query 43146 GGTTCGCGCCGCGTTCGCGTCTGCAACCCCGGTTGTGTCTGCGATTGGCCACGAGAATGA 43205 || ||||| | | |||| | | ||||| || || |||||| || |||||||| || Sbjct 510 CGTGCGCGCGGTGGCCGCGGCATCCACCCCCGTCGTCAGTGCGATCGGGCACGAGAACGA 451 Query 43206 TCGGCCGCTCCTCGACCGCGTTGTGGACCTTCGAGCGGCAACTCCGACGGATGCAGCGAA 43265 || ||| |||||||| || | |||||| || || | || ||||||||||| || || Sbjct 450 TCATCCGATCCTCGACGATGTCGCGGACCTGCGCGCCTCGACGCCGACGGATGCCGCCAA 391 Query 43266 ACGTGTCGTACCCGACGT 43283 || ||||| |||||||| Sbjct 390 GCGCGTCGTGCCCGACGT 373 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 297890956430900