Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= NC_030901.1 Length=92618 Score E Sequences producing significant alignments: (Bits) Value seq5 163 2e-35 seq2405 143 2e-29 seq706 107 1e-18 >seq5 Length=148305 Score = 163 bits (180), Expect = 2e-35 Identities = 242/338 (72%), Gaps = 4/338 (1%) Strand=Plus/Minus Query 70877 CGACACCGTGATCACCGTGATCGGAAATCTGACCGCCGATCCCGAACTGCGCTTCACCCC 70936 ||| ||||| |||||||| | || || || || ||||| ||||| ||||| | ||| | Sbjct 31305 CGAGACCGTCATCACCGTCGTGGGCAACCTCACGGCCGACCCCGAGCTGCGGTACACGCA 31246 Query 70937 CT-CGGGCGCGCCGGTCGCCAACTTCACCGTCGCAAGCACCCCGCGGTACTTCGACAAGC 70995 ||||| ||| ||||| ||||||||| |||| ||||| || |||||| | Sbjct 31245 GAACGGGCT-GCCCGTCGCGAACTTCACCATCGCGTCGACCCCCCGCACGTTCGACCGTC 31187 Query 70996 AGTCCAACGAGTGGAAGGACGCCGAGGCGCTCTTCCTGCGCTGCAAC-ATCTGGCGCGAG 71054 || | |||||||||||||||| |||||| || |||||||| || | ||||||| ||| Sbjct 31186 AGGCGAACGAGTGGAAGGACGGCGAGGCCCTGTTCCTGCG-GGCGTCGGTCTGGCGTGAG 31128 Query 71055 CCGGCCGAGAACGTCACCGAGTCGCTGTCCAAGGGCATGCGCGTCATCGTCCAGGGTCGC 71114 |||||| |||| | | |||||| ||||||||| || ||||||| ||||| Sbjct 31127 TTCGCCGAGCACGTGGCGGGTTCGCTGACCAAGGGCAGCCGTGTCATCGCGACCGGTCGT 31068 Query 71115 CTCAAGCAGCGCAGCTACGAGACGAAGGAAGGCGAGAACCGGACGGTCATCGAGCTCGAG 71174 || |||||| |||| || || || ||| ||| || | |||||| |||||| Sbjct 31067 CTGCGTCAGCGCTCCTACCAGGACCGTGACGGGCAGACCCGCACCGCCATCGAACTCGAG 31008 Query 71175 GTCGAGGAGATCGGCCCCGCGCTGCGGTACGCCACCGC 71212 || || ||||||||||| || || ||||| ||||| Sbjct 31007 GTGGACGAGATCGGCCCGAGCCTCCGCTACGCGACCGC 30970 >seq2405 Length=7261 Score = 143 bits (158), Expect = 2e-29 Identities = 301/438 (69%), Gaps = 8/438 (2%) Strand=Plus/Minus Query 42541 GCCGAGGGCCTCTTCCATCCACGCCACAAGCAGGCGCTCCCGCGTGTTCCGAAGTGCATC 42600 |||||||| | ||| | | || ||||| | |||| ||| | || || ||||| Sbjct 806 GCCGAGGGATTGTTCGACGCGTCCCGCAAGCGGCCGCTGCCGTTCCTGCCCCAGCGCATC 747 Query 42601 GGCCTGATCACCGCACCGAATAGCGACGCGGAGAAGGACGTGCTCAGCGTCGCGCGAGGA 42660 ||||| ||||||| | |||||| ||||||||||||||| || ||| |||| Sbjct 746 GGCCTCATCACCGGCGAGCGCTCCGACGCCGAGAAGGACGTGCTCCGCAACGC-CGAGCT 688 Query 42661 -CGGTGGTCGAGCGTCAGCTTCAAGCTGTCCCACAT-CAACG-TCCAGGGGCAGCGCTGC 42717 || ||| || |||| | ||| || ||| || || || | ||||| ||||| || Sbjct 687 GCGCTGGCCGGGCGTGCGGTTCC-GC-GTCGAGCACGCAGCGGTGCAGGGCGAGCGCAGC 630 Query 42718 GCCGGCGCGG-CGAAGCGAGCCATCGAGGAGTTCGACGCGGACCCGGGCGTGGACGTCAT 42776 | ||||| | || || ||| | ||| | ||||||| ||||||| ||| |||||||| Sbjct 629 GTCGGCGAGATCGTCGCC-GCCCTGGAGCTGCTCGACGCCGACCCGGACGTCGACGTCAT 571 Query 42777 CATCCTGGCCCGCGGCGGCGGCTCGAAGGAAGACCTCCTCCCGTGGTCCGACGAGGCTCT 42836 | || | ||||||||||||||| | |||| || | |||||| || Sbjct 570 CGTCATCGCCCGCGGCGGCGGCGACCCGCTGCACCTTCTGGGATTCAGCGACGAACGCCT 511 Query 42837 GGTTCGCGCCGCGTTCGCGTCTGCAACCCCGGTTGTGTCTGCGATTGGCCACGAGAATGA 42896 || ||||| | | |||| | | ||||| || || |||||| || |||||||| || Sbjct 510 CGTGCGCGCGGTGGCCGCGGCATCCACCCCCGTCGTCAGTGCGATCGGGCACGAGAACGA 451 Query 42897 TCGGCCGCTCCTCGACCGCGTTGTGGACCTTCGAGCGGCAACTCCGACGGATGCAGCGAA 42956 || ||| |||||||| || | |||||| || || | || ||||||||||| || || Sbjct 450 TCATCCGATCCTCGACGATGTCGCGGACCTGCGCGCCTCGACGCCGACGGATGCCGCCAA 391 Query 42957 ACGTGTCGTACCCGACGT 42974 || ||||| |||||||| Sbjct 390 GCGCGTCGTGCCCGACGT 373 >seq706 Length=18769 Score = 107 bits (118), Expect = 1e-18 Identities = 284/424 (67%), Gaps = 16/424 (4%) Strand=Plus/Plus Query 56753 TCATCGACTTCCTTGACCGGAACCGGCACGGATCGCCGTTCGAGCACTCCGTCTTCACCT 56812 ||||| ||| ||| || |||| ||||| ||||||||||||||| | |||||| Sbjct 2721 TCATCAACTACCTGATGCGCGACCGTCACGGCTCGCCGTTCGAGCACAACTCGCTCACCT 2780 Query 56813 TCCTGATCGAGTGCCCCATCTTCGTTGCGCGTGAGTTCATGCGCCACCGAATCGCCTCGT 56872 || | || ||||||||||| || ||||||||||||||||| ||||| | Sbjct 2781 TCTACGTGCAGGCGCCCATCTTCGTGTTCCGCGAGTTCATGCGCCACCGCATCGCGAGCT 2840 Query 56873 ACAACGAGGAATCCGGTCGATACAAGGTCATGAAGGGCGTGTTCTACGT-CCCGGCCGAC 56931 |||||||||| || || || ||| | || ||||||||||| ||||||| | Sbjct 2841 ACAACGAGGAGTCGGGCCGCTACCGCGAGCTGCGTCCGGTGTTCTACGTGCCCGGCC-CC 2899 Query 56932 GACCGGCCGCTGGTCCAGGTAGGCAAGCCGGGTGAGTATCGA-TTCGAGGCCGGGACGGT 56990 || || ||| | ||||| |||||||| || | ||| ||| ||| |||| | | Sbjct 2900 GAGCGCAACCTGCTGCAGGTCGGCAAGCCCGGCGCGTA-CGAGTTCCTCCCCGGCAGCGA 2958 Query 56991 CGAGCAG--CATGCCGTTGTCACGAGA-GCCTTTGAGCTTGCCGCCGC---CTTCACCTA 57044 ||||||| | || | || | ||||| | || | |||||| | | | ||| Sbjct 2959 CGAGCAGGTCGCGCTGGTGGC-CGAGACGACT-----CGGGCCGCCTCGATCGCCGCCTT 3012 Query 57045 CGGCCTCTACGAGCAGATGTTGGCCATGGGGATCGCCCGCGAAGTCGCTCGCGACGTCCT 57104 || ||| ||| ||| | | ||| ||||||| || ||||| ||| ||| || Sbjct 3013 CGAGGCCTATCAGCGCATGCTCGAGGCGGGCGTCGCCCGTGAGGTCGCGCGCATCGTGCT 3072 Query 57105 GCCGTTCCAGCTATACACCTCGTTCTACGTCACCATGAACGCGCGCGGCCTGATGAACTT 57164 |||| | | | ||| | ||| | ||||| || | ||||| ||| ||||||||||| Sbjct 3073 GCCGCTGAACATCTACTCGTCGATGTACGTGACGGTCAACGCCCGCTCGCTGATGAACTT 3132 Query 57165 CCTC 57168 |||| Sbjct 3133 CCTC 3136 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 296223918962581