Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= NC_030909.1 Length=50183 Score E Sequences producing significant alignments: (Bits) Value seq240 165 3e-36 seq1120 127 7e-25 >seq240 Length=32197 Score = 165 bits (182), Expect = 3e-36 Identities = 172/223 (77%), Gaps = 2/223 (1%) Strand=Plus/Minus Query 33987 GCCGTTGCGGTGCTTCGCGATGATCAACTCAGCCACGCCGCGGTACTGGGTGTCCGGGTG 34046 |||||| || ||||| ||||||| | ||| || ||| || | | | || |||| Sbjct 9208 GCCGTTACGCTGCTTGCCGATGATGATCTCGGCAGTGCCCTTGTCCGGCGAATCGGGGTT 9149 Query 34047 ATAGACCTCGTCTCGGTACACGAACATGATCACGTCGGCGTCCTGCTCGATCGCCCCGGA 34106 ||||||||||| ||||| | ||||| |||||||||||||||||| ||||| || || || Sbjct 9148 GTAGACCTCGTCGCGGTAGATGAACAGGATCACGTCGGCGTCCTGTTCGATGGCGCCCGA 9089 Query 34107 CTCGCGCAGGTCCGACATCATCGGTCGCTTGTTCGGCCGCTGCTCCAGGGAGCGGTTGAG 34166 ||||||||||| ||||| || |||||||| || |||||||||||| ||||| || Sbjct 9088 TTCGCGCAGGTCGCTCATCACGGGACGCTTGTTGGGACGCTGCTCCAGGCTTCGGTTCAG 9029 Query 34167 CTGCGACAGCACGATCA-CGGGGATACCAAGCTCCATGGCCAG 34208 |||||||||| |||||| |||| | | || ||| ||||||| Sbjct 9028 CTGCGACAGCGCGATCAGCGGGCAGTTC-AGTTCCTTGGCCAG 8987 >seq1120 Length=14217 Score = 127 bits (140), Expect = 7e-25 Identities = 214/307 (70%), Gaps = 7/307 (2%) Strand=Plus/Minus Query 33939 GAATCGCGAGTACTTACCCAGGAACGCGCACCGGACAGTGCTTGGCTCGCCGTTGCGGTG 33998 ||| |||||||| | |||| |||||||| | || || | | |||||||||||| Sbjct 6727 GAACCGCGAGTAGTGACCCTGGAACGCGATCTCGAGCGTCGCGGTCGGGCCGTTGCGGTG 6668 Query 33999 CTTCGCGATGATCAACTCAGCCACGCCGCGGTACTGGGTGTCCGGGTGATAGACCTCGTC 34058 ||| |||| ||| | || ||| |||| || |||||||| || ||||| ||| Sbjct 6667 CTTGGCGACGATGAGGTCCGCCTCGCCCGGGC---GGGTGTCCTTGTCGTAGACGGAGTC 6611 Query 34059 TCGGTACACGAACATGATCACGTCGGCGTCCTGCTCGATCGCCCCGGACTCGCGCAGGTC 34118 |||| || | || | || |||||||||||||||||| | || || || |||||||| Sbjct 6610 GCGGTGCAGCAGGATCACCATGTCGGCGTCCTGCTCGATGGAGCCTGATTCACGCAGGTC 6551 Query 34119 CGACATCATCGGTCGCTTGTTCGGCCGCTGCTCCAGGGAGC--GGTTGAGCTGCGACAGC 34176 || | || ||||||| | | |||||||| || | | |||| ||||||||||| Sbjct 6550 GCTCACCTGGGGACGCTTGTCCTGGCGCTGCTC--GGAACCACGGTTCAGCTGCGACAGT 6493 Query 34177 ACGATCACGGGGATACCAAGCTCCATGGCCAGTAGCTTGCACTGGCGGGACATGTCGCTG 34236 |||| || || | |||||| | ||||| |||||| | || || | |||||| Sbjct 6492 GCGATGACCGGCACCTGCAGCTCCTTCGCCAGGAGCTTGAGCGCCCGCGAGAACTCGCTG 6433 Query 34237 ACGTCCT 34243 || |||| Sbjct 6432 ACCTCCT 6426 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 160448757825510