Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= NC_030911.1 Length=45858 Score E Sequences producing significant alignments: (Bits) Value seq5 181 3e-41 >seq5 Length=148305 Score = 181 bits (200), Expect = 3e-41 Identities = 250/347 (72%), Gaps = 2/347 (1%) Strand=Plus/Minus Query 36171 ATGGCAGGCGAAACCATCATCACGGTAATCGGCAACCTGACAGCCGATCCGGAACTGCGG 36230 ||||| ||||| ||| ||||||| || | |||||||| || ||||| || || |||||| Sbjct 31313 ATGGCCGGCGAGACCGTCATCACCGTCGTGGGCAACCTCACGGCCGACCCCGAGCTGCGG 31254 Query 36231 TTCACTCCGTCCGGCGCGGCGGTCGCGAACTTCACGGTCGCTTCGACTCCGCGACAGTTC 36290 | ||| | | ||| | | |||||||||||||| |||| ||||| || || |||| Sbjct 31253 TACACGCAGAACGGGCTGCCCGTCGCGAACTTCACCATCGCGTCGACCCCCCGCACGTTC 31194 Query 36291 GACCGGGACGCGAACGAGTGGAAGGACGGCGATCCGCTGTTCATGCGCTGCAAC-CTGTG 36349 ||||| | ||||||||||||||||||||||| | |||||| |||| || | | || Sbjct 31193 GACCGTCAGGCGAACGAGTGGAAGGACGGCGAGGCCCTGTTCCTGCG-GGCGTCGGTCTG 31135 Query 36350 GCGTGACGCGGCGGAGAACGTCACGGACTCGCTGTCGAAGGGGACTCGGGTCATCGTGCA 36409 |||||| || ||| |||| ||| |||||| | ||||| | || ||||||| | Sbjct 31134 GCGTGAGTTCGCCGAGCACGTGGCGGGTTCGCTGACCAAGGGCAGCCGTGTCATCGCGAC 31075 Query 36410 GGGCCGGCTGAAACAGCGGAGCTACGAGGACAAAGAGGGCGTCACGCGGACCATCGTCGA 36469 || || ||| ||||| |||| ||||| || || || || ||| | |||| Sbjct 31074 CGGTCGTCTGCGTCAGCGCTCCTACCAGGACCGTGACGGGCAGACCCGCACCGCCATCGA 31015 Query 36470 GCTGGAAGTGGACGAGATCGGTCCGTCCCTGAAGTACGCGACGGCGA 36516 || || |||||||||||||| ||| ||| |||||||| |||| Sbjct 31014 ACTCGAGGTGGACGAGATCGGCCCGAGCCTCCGCTACGCGACCGCGA 30968 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146610072461160