Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= NC_030917.1 Length=93577 Score E Sequences producing significant alignments: (Bits) Value seq44 857 0.0 seq5 208 5e-49 seq2405 170 1e-37 seq180 89.7 3e-13 seq15 82.4 5e-11 >seq44 Length=56345 Score = 857 bits (950), Expect = 0.0 Identities = 765/950 (81%), Gaps = 16/950 (2%) Strand=Plus/Minus Query 78219 AGGCCATCAACTGGAACAAGGTCACCGACGAGGTCGACGACACCGTGTGGGATCGACTCA 78278 ||||||||||||||||| || ||||| |||| |||||| | || |||| Sbjct 3695 AGGCCATCAACTGGAACCGCATCGAGGACGACAAGGACGTGGAGGTGTGGAACCGCCTCA 3636 Query 78279 CCGGCAACTTCTGGTTGCCCGAGAAGGTACCGGTGTCCAACGACATCCCATCCTGGGACA 78338 | |||||||||||| ||||||||||||| ||| | ||||| ||| | | || |||| | Sbjct 3635 CGGGCAACTTCTGGCTGCCCGAGAAGGTGCCGCTCTCCAATGACGTGCAGTCGTGGGCGA 3576 Query 78339 CCCTTACGCCGGAAGAGAAGGAACTCACTATGCGTGTGTTCACCGGCCTCACCCTGCTCG 78398 | || || ||||||||| || | ||||| ||||| ||||||||||||||||||||||||| Sbjct 3575 CGCTGACCCCGGAAGAGCAGCAGCTCACGATGCGGGTGTTCACCGGCCTCACCCTGCTCG 3516 Query 78399 ACACCATCCAGGGCACAGTTGGCGCCATCTCGCTCATCGCCGACGCCAACACCCCGCACG 78458 |||| ||||||||||| || ||||| ||||||||||| ||||||| |||||||||| Sbjct 3515 ACACGATCCAGGGCACGGTGGGCGCGGTCTCGCTCATCCCCGACGCGCTGACCCCGCACG 3456 Query 78459 AGGAGGCGGTGCTCACCAACATCGCGTTCATGGAGTCGGTACACGCCAAGTCCTACAGCT 78518 ||||||| || ||| ||||||||||||||||||||||| ||||||||| |||| | Sbjct 3455 AGGAGGCCGTCTACACGAACATCGCGTTCATGGAGTCGGTGCACGCCAAGAGCTACTCGT 3396 Query 78519 CGATCTTCTCAACGCTATGCTCCTCCAAGCAGATTGACGAGGCGTTCCGTTGGTCGGAGG 78578 |||||||||| ||||| |||||| | ||| |||| |||||||||||||| |||||| | Sbjct 3395 CGATCTTCTCGACGCTGTGCTCCACGAAGGAGATCGACGAGGCGTTCCGCTGGTCGATCG 3336 Query 78579 AGAACGAGTACCTGCAGCGCAAGGCCCAGATCGTCCTGGACTACTACCGCGGCGACGACC 78638 |||||||| |||||||||||||||| ||||||||| |||||||||||||||||||||| | Sbjct 3335 AGAACGAGAACCTGCAGCGCAAGGCTCAGATCGTCATGGACTACTACCGCGGCGACGAAC 3276 Query 78639 CCTTGAAGCGGAAGGTGGCCAGTACGCTCCTGGAGGGCTTCCTCTTCTACTCGGGCTTCT 78698 || | ||||| ||||||||| ||||| || ||| ||||||||||| |||||||||| Sbjct 3275 CCCTCAAGCGCAAGGTGGCCTCGACGCTGCTCGAGTCGTTCCTCTTCTATTCGGGCTTCT 3216 Query 78699 ACCTGCCGATGTACTGGTCGAGCCGCGCCAAGCTGACGAACACCGCGGACGTGATCCGGT 78758 ||||||||||| |||||||||||||||| ||||| || |||||||| ||| ||||||| Sbjct 3215 ACCTGCCGATGCACTGGTCGAGCCGCGCGAAGCTCACCAACACCGCCGACATGATCCGCC 3156 Query 78759 TGATTATCCGAGACGAAGCAGTTCATGGGTACTACATCGGATACAAGTACCAGCGAGGCC 78818 | || ||||| ||||| || || || || ||||||||||| ||||||| |||||| || | Sbjct 3155 TCATCATCCGCGACGAGGCCGTGCACGGCTACTACATCGGCTACAAGTTCCAGCGGGGAC 3096 Query 78819 TCGAGACCCAGG-GGCCG-----GCGCGGCAGGCTGAGCTCAAGGAGTACACGTTCGATC 78872 |||||| ||| || || | || ||| ||||| || || ||||| ||| | Sbjct 3095 TCGAGA---AGGTGGACGAGGAAACCCGTCAG---GAGCTGAAAGACTACACCTTCTCGC 3042 Query 78873 TGCTCTCGGAGCTCTACGACAACGAGTGTG-ACTACACCGAGCAGCTCTATGACGACGTC 78931 |||| | ||||| |||||||||||| ||| | ||||| || | ||||| |||| |||| Sbjct 3041 TGCTGTACGAGCTTTACGACAACGAG-GTGCAGTACACGCAGGACCTCTACGACGGCGTC 2983 Query 78932 GGACTCACCGAGGATGTCAAGAAGTTCCTGCGCTACAACGGCAACAAGGCGCTGATGAAC 78991 || ||||||||||| |||||||||||||||| |||||||| |||||||||||| |||||| Sbjct 2982 GGTCTCACCGAGGACGTCAAGAAGTTCCTGCACTACAACGCCAACAAGGCGCTCATGAAC 2923 Query 78992 CTCGGCTACGAAGCACTGTTCCCCAAGGAAGAGACC-ATGGCAGACCCGGCCATCATGTC 79050 |||||||||||||| |||||||| | | |||| | | ||| |||||| ||| | || Sbjct 2922 CTCGGCTACGAAGCCATGTTCCCCTCGACGGTGACCAACGTCAG-CCCGGCGATCCTCTC 2864 Query 79051 CGCGCTCTCACCAGGCGGCGACGAGAACCACGACTTCTTCTCCGGGTCGGGCTCGAGCTA 79110 || || || || || ||||||||||||||||||||||||||| ||||||||| || Sbjct 2863 GGCACTGTCGCCCAACGCCGACGAGAACCACGACTTCTTCTCCGGCTCGGGCTCGTCGTA 2804 Query 79111 CGTCATCGGCAAAGCTGAAGCCACGGCAGATGAGGACTGGGACTTCTGAT 79160 ||||||||||| |||| || || | || || |||||||||||||||| Sbjct 2803 TGTCATCGGCAAGGCTGTCGCGACCGAGGACGACGACTGGGACTTCTGAT 2754 >seq5 Length=148305 Score = 208 bits (230), Expect = 5e-49 Identities = 252/337 (75%), Gaps = 7/337 (2%) Strand=Plus/Minus Query 69633 GACACCGTCATCACCGTCATCGGTAACCTGACCGCCGACCCCGAACTCCGGTTCACGCCC 69692 || ||||||||||||||| | || ||||| || ||||||||||| || |||| ||||| Sbjct 31304 GAGACCGTCATCACCGTCGTGGGCAACCTCACGGCCGACCCCGAGCTGCGGTACACGCAG 31245 Query 69693 TCCGGTGCCGCG-GTCGCGAACTTCACCGTCGCGTCGACCCCGCGGTACTTCGACAAGCA 69751 ||| || || ||||||||||||||| ||||||||||||| || |||||| || Sbjct 31244 AACGG-GCTGCCCGTCGCGAACTTCACCATCGCGTCGACCCCCCGCACGTTCGACCGTCA 31186 Query 69752 GTCGAACGAGTGGAAGGATGCCGAGGCACTCTTCCTGCGCTGCAAC-GTCTGGCGCGAGT 69810 | |||||||||||||||| | |||||| || |||||||| || | |||||||| |||| Sbjct 31185 GGCGAACGAGTGGAAGGACGGCGAGGCCCTGTTCCTGCG-GGCGTCGGTCTGGCGTGAGT 31127 Query 69811 ACGCCGAGAACGTGACTGAGTCGCTCCAGAAGGGCGCCCGCGTCATCGTCCAGGGCAAGC 69870 ||||||| ||||| | | ||||| |||||| ||| ||||||| || | Sbjct 31126 TCGCCGAGCACGTGGCGGGTTCGCTGACCAAGGGCAGCCGTGTCATCGCGACCGGTCGTC 31067 Query 69871 TCAAGCAGCGGTCCTACGAGAA---GGATGGCCAGCCGCGCACCACCTTCGAGCTCGAGG 69927 | ||||| |||||| || | || || ||| | |||||| || |||| ||||||| Sbjct 31066 TGCGTCAGCGCTCCTACCAGGACCGTGACGGGCAGACCCGCACCGCCATCGAACTCGAGG 31007 Query 69928 TTGAGGAGATCGGCCCCGCACTCCGGTACGCCACCGC 69964 | || ||||||||||| ||||| ||||| ||||| Sbjct 31006 TGGACGAGATCGGCCCGAGCCTCCGCTACGCGACCGC 30970 >seq2405 Length=7261 Score = 170 bits (188), Expect = 1e-37 Identities = 275/387 (71%), Gaps = 14/387 (4%) Strand=Plus/Minus Query 42096 AGCTCATCGGCCTGATCACCGCGGAGGGCAGCGACGCCGAGAAGGACGTCCTGAACGTCG 42155 ||| ||||||||| ||||||| ||| || |||||||||||||||||| || | || Sbjct 754 AGCGCATCGGCCTCATCACCGGCGAGCGCTCCGACGCCGAGAAGGACGTGCTCCGCAACG 695 Query 42156 CCCGGGACCGATGGCCGCACGTGCAGTTCAA-GCCGTACCACATCCCTGTGCAGGGCCAA 42214 || | || |||||| ||||| |||| | || | ||| | ||||||||| | Sbjct 694 CCGAGCTGCGCTGGCCGGGCGTGCGGTTCCGCGTCG-AGCACGCAGCGGTGCAGGGCGAG 636 Query 42215 CGCTGCGCAGGACGTGC-CACCGCCGCCCTGAAGGCACTGGATGCCGACCCCGAGGTTGA 42273 ||| ||| || || | | |||||||||| || || || |||||||| || || || Sbjct 635 CGCAGCGTCGG-CGAGATCGTCGCCGCCCTGGAGCTGCTCGACGCCGACCCGGACGTCGA 577 Query 42274 CGTCATCATCTTCGCCCGCGGCGGCGGGTCCAACCAGGACCTCCTTCCCTGG---TC--C 42328 ||||||| || |||||||||||||||| | ||| | | ||||| ||| || | Sbjct 576 CGTCATCGTCATCGCCCGCGGCGGCGG---CGACCCGCTGCACCTTC--TGGGATTCAGC 522 Query 42329 GACGAGGGCCTCTCCCGGGCCGTGTTCGCCGCTAACACGCCCACGGTCAGCGCCATCGGA 42388 ||||| ||||| || || ||| ||| || ||| ||| ||||| || ||||| Sbjct 521 GACGAACGCCTCGTGCGCGCGGTGGCCGCGGCATCCACCCCCGTCGTCAGTGCGATCGGG 462 Query 42389 CACGAGAACGACAAGCCGATGCTGGACCGGGTTGTGGACCTGCGAGCTGCGACTCCGACA 42448 ||||||||||| | ||||| || ||| || | ||||||||| || |||| ||||| Sbjct 461 CACGAGAACGATCATCCGATCCTCGACGATGTCGCGGACCTGCGCGCCTCGACGCCGACG 402 Query 42449 GATGCGGCAAAACGTGTCGTACCCAAC 42475 ||||| || || || ||||| ||| || Sbjct 401 GATGCCGCCAAGCGCGTCGTGCCCGAC 375 >seq180 Length=35712 Score = 89.7 bits (98), Expect = 3e-13 Identities = 180/259 (69%), Gaps = 6/259 (2%) Strand=Plus/Minus Query 64752 TGAACCCGCACGTAGGCGTCATCTACGGCGACAGCATCACCCTCGAACG-GGCTGCGGTC 64810 || |||||||||| ||| | ||||||||||| |||||| || | || ||| ||| | Sbjct 29160 TGGACCCGCACGTCGGCCTGATCTACGGCGATTCCATCACGCTGGCGCGTGGCCGCGA-C 29102 Query 64811 ATCACCGGTCGCCTCGCCCAGAT-GGGTTATGCCTCAACCAACGTCGTGTTCGGTGTCGG 64869 ||| | ||| | | ||| ||| | ||| || |||||| || | || |||| Sbjct 29101 ATC-CTGGTGCGGTTGGAAAGAAAGGGGTTTGCGTCCGGCAACGTGGTCCTGGGCATCGG 29043 Query 64870 TTCATACACCTACCAGTACAACACCCGAGACACATTCGGTTCGGCCATGAAGGCCACCTG 64929 || ||||||||||| ||| ||||| |||| ||||| | ||| | ||||| || | Sbjct 29042 CTCCTACACCTACCAATACCTGACCCGCGACAGCTTCGGCTGGGCGCTCAAGGCGACGTA 28983 Query 64930 GGCCGAGGTCGACGGC-AAGGGTGTCAACCTGCTCAAGGACCCGGTCACCGACGACGGGA 64988 ||||||||| | ||| || | || ||| | ||||||||||| |||||| ||| Sbjct 28982 CGCCGAGGTCAATGGCGAACCGCAGGAA-CTGGTGAAGGACCCGGTGACCGACTCCGGCG 28924 Query 64989 CGAAGAGGTCGGCTACGGG 65007 |||| | ||||| | ||| Sbjct 28923 TGAAGCGTTCGGCCAAGGG 28905 >seq15 Length=81684 Score = 82.4 bits (90), Expect = 5e-11 Identities = 62/69 (90%), Gaps = 3/69 (4%) Strand=Plus/Plus Query 4263 GGGCG-TAGCTCAATTGGAAGAGCAGCGGTCTCCAAAACCGCCGG-TGTAGGTTCGAGTC 4320 ||||| |||||||||||| ||||||||||||||||||||||| || || |||||||| || Sbjct 16575 GGGCGGTAGCTCAATTGGCAGAGCAGCGGTCTCCAAAACCGCAGGTTGCAGGTTCGATTC 16634 Query 4321 CTG-CCGCC 4328 ||| ||||| Sbjct 16635 CTGTCCGCC 16643 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 299292419791982