Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= NC_030929.1 Length=49033 Score E Sequences producing significant alignments: (Bits) Value seq75 239 1e-58 seq424 104 7e-18 >seq75 Length=46716 Score = 239 bits (264), Expect = 1e-58 Identities = 503/739 (68%), Gaps = 27/739 (4%) Strand=Plus/Plus Query 42364 TCGGCGGCAGCCTTTGCCTCGGTTTCGCGGCGAGCGGCGGCTTCGCGTTCTTCCTGGGCG 42423 ||||| || ||| ||||||| ||||||||| |||||||| ||||| || |||||||| Sbjct 104 TCGGCAGCGGCCAGGGCCTCGGCTTCGCGGCGGGCGGCGGCGTCGCGCTCGGCCTGGGCG 163 Query 42424 CGTCGTTCCGCTGCAAGGCGCTCGGC---CTCGGCTGCTTCGCGGGCAATGCGCTCCTCG 42480 || || ||| | ||||| ||| |||||| ||||||||||| |||||||| || Sbjct 164 CGGGTCTCTGCTTC---GCGCTGGGCGCGCTCGGCCGCTTCGCGGGCGATGCGCTCTTCA 220 Query 42481 CGCTCTTTCTGCTCGCGTGCTGCTGCTTCGGCGCGCAGGCGTTCCAGTTCGGCCTGCTCG 42540 || || ||||| |||| | ||| | |||| |||||||| ||||||||||||||||| Sbjct 221 CGTTCCTTCTGTGCGCGCTCGGCTTCAGCGGCACGCAGGCGCGCCAGTTCGGCCTGCTCG 280 Query 42541 GCTTCGAACTTCTCACGGGCAACCAGGGCTT--CTCGGAGAGCGAT-CAAAGCCTTATCT 42597 || ||| ||||||| || || ||||||||| || | || || | || | Sbjct 281 GCGTCGTACTTCTCGCGCGCCGCCAGGGCTTGCGTCAGGGA---ATCCTGGGCGCGGGCC 337 Query 42598 TTGGCGCGAGCAGCCTCTGCCTCGAACTCTTCCCAGGCTTCACTTATGGCCAGGCCTTCC 42657 ||| |||| ||||| |||||| | || ||||||| || | ||| || | | | Sbjct 338 TTGACGCGGTGCGCCTCGGCCTCGTATTCCTCCCAGGACGCATCCACGGCGCGGGCATTC 397 Query 42658 AACCAAGCGATGTTGGCTTTGAGTTCATTAGAGTCCAGATCGCGGCATTC--CAG-GCGA 42714 | | ||||| | || || || | | ||||| |||||| || | | ||| Sbjct 398 ACCTCTTCGATGGTCGCGCGCAGCTCGGTCGCATCCAGGTCGCGGTGCTCGTCGGCGCGC 457 Query 42715 AGGTTTATCTTGTCGATCTCGCCCTGAT-GACGCGCAACCCGC--GCCGCTTCAGCCTCT 42771 ||| | | |||| | ||||| | | |||| | ||| || | || || || Sbjct 458 AGGCGGAACCACTCGA---CACCCTGCTGGTGGCGCTGCTCGCGTGCTTCCTCGGCGGCT 514 Query 42772 TCCCACTCGGTCAACGGACTGCGCA---CTTCGGCCTGCCAGGAATCCAACAGGTCGCGC 42828 ||||| |||||| ||| ||||| |||||||| || | |||| ||||||| Sbjct 515 TCCCATGCGGTCAGCGGCGCGCGCACCTCTTCGGCCAGC---GCGTCCAGGGTGTCGCGC 571 Query 42829 ATCCGCTTACGCTCGGCATCGATCTTCTTCGGAACTTCCTTCAGCTCAGCGACCAATTCC 42888 || ||||| ||||| || ||||| ||| || || ||||| || || |||||| | | Sbjct 572 ATGCGCTTGCGCTCCGCGTCGATGCGCTTGGGGACGTCCTTGAGTTCGTCGACCAGCTGC 631 Query 42889 TTGCCCACGTTGTCCAGCGCCGTCTTGGAGCGGGCGACCTTGTAGGCGATGGAAGCGATG 42948 ||||||| | ||||||||| ||||| || | ||||||| | || | | ||| || Sbjct 632 TTGCCCAGGGCGTCCAGCGCGGTCTTCGATTTGCGGACCTTGAACGCCAGGCTGGCGGTG 691 Query 42949 GCATCGCGGCCCTTGCGGGTTGAAACGTCCGGCACGAAGCCGTCGATTTCCTCGCGAATC 43008 || || ||||| || ||| || | ||| |||||| |||| | ||| |||| ||| Sbjct 692 GCCTCACGGCCTTTCTTGGTCGACATGTCAGGCACGTGGCCGGACACTTCGGCGCGGATC 751 Query 43009 TTGGCCAGGAACGGGTCAAGGCCATTGGCTGCCGAGTAGACTTGCAGAGCGGTTTCTTTG 43068 |||||||| | || || ||||| ||| || || || | ||| |||||||| | | Sbjct 752 TTGGCCAGCCAGGGCTCCAGGCCGCTGGGCTTGGAATACACCTCCAGCGCGGTTTCCTGG 811 Query 43069 GCTGGTACTTCGACCAGTT 43087 | || | |||| | |||| Sbjct 812 GGCGGCAGTTCGGCGAGTT 830 >seq424 Length=24479 Score = 104 bits (114), Expect = 7e-18 Identities = 154/216 (71%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 42037 CCTCAGTAGTTGATTGTGATGTGAGGAACCTTGCGCTGAGCGATCAGTGTGATCGCCTGC 42096 ||||| ||| |||| ||||| || | || || |||||||| |||| ||||||| Sbjct 24224 CCTCAATAGGTGATACGGATGTTGGGGATGGCGCCCTTGGCGATCAGCGTGACCGCCTGC 24283 Query 42097 TTGGCGCATTCCTCGGGCATGCCGCCGGCGATCAGGGCCGCCAGGGCTTCGTTGTTGATG 42156 |||||||| ||||||||||||||| | || | ||| ||||||| | ||||||| Sbjct 24284 TTGGCGCAGTCCTCGGGCATGCCGGCCAGGACAAAGGCATCCAGGGCGGTGCGGTTGATG 24343 Query 42157 GCTTTCTTGTGGGCCTTGTCGGCTTCTCGGGCTGCTGCCTCGCGCT-CGATCCTGGCTTG 42215 | |||||| ||||||||||| || ||| || | ||| ||| | | ||| || Sbjct 24344 CTTGCCTTGTGCGCCTTGTCGGCCTCGCGGCGCGCGGTTTCG-GCTGCCGCCGCGGCCTG 24402 Query 42216 CTCGTCTGCCTGCCGTTGGCGCTCTGCGGCAGCGGC 42251 |||||| || || ||||| || ||||| ||||| Sbjct 24403 CTCGTCGGCAATGCGCTGGCGTTCGGCGGCGGCGGC 24438 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 156769107381810