Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= NC_030936.1 Length=93843 Score E Sequences producing significant alignments: (Bits) Value seq5 168 4e-37 seq706 150 1e-31 seq2405 143 2e-29 >seq5 Length=148305 Score = 168 bits (186), Expect = 4e-37 Identities = 241/337 (72%), Gaps = 2/337 (1%) Strand=Plus/Minus Query 72306 CGACACCGTGATCACCGTGATCGGAAACCTGACCGCCGATCCCGAACTGCGCTTCACCCC 72365 ||| ||||| |||||||| | || ||||| || ||||| ||||| ||||| | ||| | Sbjct 31305 CGAGACCGTCATCACCGTCGTGGGCAACCTCACGGCCGACCCCGAGCTGCGGTACACGCA 31246 Query 72366 CTCGGGTGCGCCGGTCGCCAACTTCACCGTCGCAAGCACCCCCCGGTACTTCGACAAGCA 72425 || ||| ||||| ||||||||| |||| |||||||| |||||| || Sbjct 31245 GAACGGGCTGCCCGTCGCGAACTTCACCATCGCGTCGACCCCCCGCACGTTCGACCGTCA 31186 Query 72426 GAGCAACGAGTGGAAGGACGCCGAGGCGCTCTTCCTGCGCTGCAAC-ATCTGGCGCGAGC 72484 | |||||||||||||||| |||||| || |||||||| || | ||||||| ||| Sbjct 31185 GGCGAACGAGTGGAAGGACGGCGAGGCCCTGTTCCTGCG-GGCGTCGGTCTGGCGTGAGT 31127 Query 72485 CGGCCGAGAACGTCGCCGAGTCGCTGACCAAGGGCATGCGCGTCATCGTCCAGGGACGCC 72544 |||||| |||| || | |||||||||||||||| || ||||||| || || | Sbjct 31126 TCGCCGAGCACGTGGCGGGTTCGCTGACCAAGGGCAGCCGTGTCATCGCGACCGGTCGTC 31067 Query 72545 TCAAGCAGCGCAGCTACGAGACGAAGGAAGGCGAGAACCGGACGGTCATCGAGCTCGAGG 72604 | |||||| |||| || || || ||| ||| || | |||||| ||||||| Sbjct 31066 TGCGTCAGCGCTCCTACCAGGACCGTGACGGGCAGACCCGCACCGCCATCGAACTCGAGG 31007 Query 72605 TCGAGGAGATCGGCCCCGCGCTGCGGTACGCCACCGC 72641 | || ||||||||||| || || ||||| ||||| Sbjct 31006 TGGACGAGATCGGCCCGAGCCTCCGCTACGCGACCGC 30970 >seq706 Length=18769 Score = 150 bits (166), Expect = 1e-31 Identities = 292/423 (69%), Gaps = 6/423 (1%) Strand=Plus/Plus Query 57694 GGCTTCATCGACTTCCTTGACCGGAACCGACACGGATCGCCGTTCGAGCACTCCGTCTTC 57753 ||| ||||| ||| ||| || |||| ||||| ||||||||||||||| | || Sbjct 2717 GGCCTCATCAACTACCTGATGCGCGACCGTCACGGCTCGCCGTTCGAGCACAACTCGCTC 2776 Query 57754 ACCTTCCTGGTCGAGTGCCCCATATTCGTTTCGCGTGAGTTCATGCGCCACCGAATCGCC 57813 |||||| || || ||||| ||||| | || ||||||||||||||||| ||||| Sbjct 2777 ACCTTCTACGTGCAGGCGCCCATCTTCGTGTTCCGCGAGTTCATGCGCCACCGCATCGCG 2836 Query 57814 TCGTACAACGAGGAATCCGGTCGATACAAGGTCATGAAGGGCGTGTTCTACGT-CCCGGC 57872 ||||||||||| || || || ||| | || ||||||||||| |||||| Sbjct 2837 AGCTACAACGAGGAGTCGGGCCGCTACCGCGAGCTGCGTCCGGTGTTCTACGTGCCCGGC 2896 Query 57873 CGACGACCGGCCGCTGGTCCAGGTGGGCAAGCCGGGTGAGTATCGA-TTCGAGGCCGGGA 57931 | ||| || ||| | ||||| |||||||| || | ||| ||| ||| |||| | Sbjct 2897 C-CCGAGCGCAACCTGCTGCAGGTCGGCAAGCCCGGCGCGTA-CGAGTTCCTCCCCGGCA 2954 Query 57932 CGCTCGAGCAGCACGAGCTGGTGACAGACCTGTTCCAGCTCGCCGCCGAT-ACCGGCTAC 57990 ||||||| || ||||||| | || | | | |||| |||| ||| || | Sbjct 2955 GCGACGAGCAGGTCGCGCTGGTGGCCGAGACGACTCGGGCCGCC-TCGATCGCCGCCTTC 3013 Query 57991 AACCTCTACCAGACCATGCTCGACGCCGGCATTGCCCGGGAAGTTGCGCGCGACGTCCTG 58050 | ||| ||| ||||||||| || ||| | ||||| || || |||||| ||| ||| Sbjct 3014 GAGGCCTATCAGCGCATGCTCGAGGCGGGCGTCGCCCGTGAGGTCGCGCGCATCGTGCTG 3073 Query 58051 CCGTTCCAGCTGTACACCTCGTTCTACGTCACCATGAACGCGCGCGGCCTGATGAACTTC 58110 ||| | | | ||| | ||| | ||||| || | ||||| ||| |||||||||||| Sbjct 3074 CCGCTGAACATCTACTCGTCGATGTACGTGACGGTCAACGCCCGCTCGCTGATGAACTTC 3133 Query 58111 CTC 58113 ||| Sbjct 3134 CTC 3136 >seq2405 Length=7261 Score = 143 bits (158), Expect = 2e-29 Identities = 301/438 (69%), Gaps = 8/438 (2%) Strand=Plus/Minus Query 43051 GCCGAGGGCCTCTTCCATCCACGCCACAAGCAGGCGCTCCCGCGTGTTCCGAAGTGCATC 43110 |||||||| | ||| | | || ||||| | |||| ||| | || || ||||| Sbjct 806 GCCGAGGGATTGTTCGACGCGTCCCGCAAGCGGCCGCTGCCGTTCCTGCCCCAGCGCATC 747 Query 43111 GGCCTGATCACCGCACCGAATAGCGACGCGGAGAAGGACGTGCTCAGCGTCGCGCGAGGA 43170 ||||| ||||||| | |||||| ||||||||||||||| || ||| |||| Sbjct 746 GGCCTCATCACCGGCGAGCGCTCCGACGCCGAGAAGGACGTGCTCCGCAACGC-CGAGCT 688 Query 43171 -CGGTGGTCGAGCGTCAGCTTCAAGCTGTCCCACAT-CAACG-TCCAGGGGCAGCGCTGC 43227 || ||| || |||| | ||| || ||| || || || | ||||| ||||| || Sbjct 687 GCGCTGGCCGGGCGTGCGGTTCC-GC-GTCGAGCACGCAGCGGTGCAGGGCGAGCGCAGC 630 Query 43228 GCCGGCGCGG-CGAAGCGAGCCATCGAGGAGTTCGACGCGGACCCGGGCGTGGACGTCAT 43286 | ||||| | || || ||| | ||| | ||||||| ||||||| ||| |||||||| Sbjct 629 GTCGGCGAGATCGTCGCC-GCCCTGGAGCTGCTCGACGCCGACCCGGACGTCGACGTCAT 571 Query 43287 CATCCTGGCCCGCGGCGGCGGCTCGAAGGAAGACCTCCTCCCGTGGTCCGACGAGGCTCT 43346 | || | ||||||||||||||| | |||| || | |||||| || Sbjct 570 CGTCATCGCCCGCGGCGGCGGCGACCCGCTGCACCTTCTGGGATTCAGCGACGAACGCCT 511 Query 43347 GGTTCGCGCCGCGTTCGCGTCTGCAACCCCGGTTGTGTCTGCGATTGGCCACGAGAATGA 43406 || ||||| | | |||| | | ||||| || || |||||| || |||||||| || Sbjct 510 CGTGCGCGCGGTGGCCGCGGCATCCACCCCCGTCGTCAGTGCGATCGGGCACGAGAACGA 451 Query 43407 TCGGCCGCTCCTCGACCGCGTTGTGGACCTTCGAGCGGCAACTCCGACGGATGCAGCGAA 43466 || ||| |||||||| || | |||||| || || | || ||||||||||| || || Sbjct 450 TCATCCGATCCTCGACGATGTCGCGGACCTGCGCGCCTCGACGCCGACGGATGCCGCCAA 391 Query 43467 ACGTGTCGTACCCGACGT 43484 || ||||| |||||||| Sbjct 390 GCGCGTCGTGCCCGACGT 373 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300143536810356