Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= NC_030942.1 Length=55524 Score E Sequences producing significant alignments: (Bits) Value seq5 159 1e-34 seq923 91.5 5e-14 >seq5 Length=148305 Score = 159 bits (176), Expect = 1e-34 Identities = 296/429 (69%), Gaps = 14/429 (3%) Strand=Plus/Minus Query 45160 GCGATGGGTGGGCATCAGTCCGCCCGCATGATCACCGACACATGGCTCACCCCGCCACAC 45219 || ||||| | ||| ||||| || ||| ||| ||||||||||| ||||| || Sbjct 29283 GCAATGGGCGCGCACCAGTCAGCGCGCGCCGACACAACGACATGGCTCACGCCGCCCGAC 29224 Query 45220 ATCATCGACGCACTCGGGCCATTCGATCTCGACCCCTGCGCCGCGCCAGAGCCTCGCCCC 45279 |||||||| ||| || || |||||||||||||| |||||||| || ||| ||||| Sbjct 29223 ATCATCGAGAAACTGGGTCCGTTCGATCTCGACCCGTGCGCCGCTCCGTCGCCGCGCCCG 29164 Query 45280 TGGGATACCGCGACCAAGCACTACACGCTGCCGACTGACGGACTCGCGGAGCCG--TGGC 45337 ||| |||||| ||| | ||| || ||||| ||||| | ||| ||| Sbjct 29163 TGGCCGACCGCGGGGCGGCATATCGAGCTTCCCGAGGACGGCCTCGCTG--CCGACTGGA 29106 Query 45338 ACGGTCGGGTCTGGCTTAACCCTCCGTA----TTCGCGTGAAGCGGTGAAGTGGCTAGCC 45393 |||| || ||||| || || ||||| ||||| ||| ||||||||||| | Sbjct 29105 CGGGTCATGTGTGGCTCAATCCGCCGTACAGCTTCGCC----GCGTGGAAGTGGCTAGAC 29050 Query 45394 AGGCTCGCCCACCACGGTCGCGGTACTGCGCTGGTCTTCGCCCGGACCGAGACAGCGTGG 45453 | |||||| |||||| || | ||||| ||||||| || || ||||| ||| | Sbjct 29049 AAGCTCGCGGCGCACGGTGATGGCATCGCGCTCATCTTCGCACGCACGGAGACGGCGGGC 28990 Query 45454 TTCGTCGCGACA-GTATGGCAACGAGCGTCGGCCGTCCTATTCCTGCATGGGCGCCTGCA 45512 |||||||| ||| || ||| | ||| | | || || ||||| || ||||| || | Sbjct 28989 TTCGTCGC-ACAGGTGTGGGAGAAGGCGACAGGTGTGCTGTTCCTTCACGGGCGGCTCTA 28931 Query 45513 TTTTCACTACTCCGACGGAGAGCGCGCTGCGGCCAACGCTGGCGCGCCCTCGTGCCTTGT 45572 || ||| ||||||| || ||||| ||||| ||| || || || |||||||| || Sbjct 28930 CTTCCACCGGCCCGACGGTGAACGCGCCGCGGCGAACAGCGGAGCACCGTCGTGCCTCGT 28871 Query 45573 TGCTTACGG 45581 || ||||| Sbjct 28870 CGCGTACGG 28862 >seq923 Length=16245 Score = 91.5 bits (100), Expect = 5e-14 Identities = 134/189 (71%), Gaps = 3/189 (2%) Strand=Plus/Plus Query 42801 TGGCACGACGACGCTCTCTGCTCGCAGGTTGATGTGGGGGACATGTTCTTCCCTGAGAAG 42860 ||||| ||||||||||||||||||| || | || ||||||||| |||||| Sbjct 6868 TGGCAGACCGACGCTCTCTGCTCGCAGACGGACCCCGAGGC---GTTCTTCCCCGAGAAG 6924 Query 42861 GGTGGATCGACCGCAGAAGCCAAAACGATCTGCGCCGGGTGTGATGTGCGCGAACAGTGC 42920 || ||||||||| || ||||| |||||| || || || || |||| | ||| Sbjct 6925 GGCGGATCGACCCGCGACGCCAAGCGCATCTGCTCCACCTGCGACGTCCGCGGCGAATGC 6984 Query 42921 CTGGAATGGGCGCTCGAGAACCAAGAACGGTTCGGGATCTTCGGGGGCAAGTCGGAGCGT 42980 || || | |||||||||||| | ||||| ||||| |||| || || | ||||| Sbjct 6985 CTCGACTACGCGCTCGAGAACGACGAACGCTTCGGTATCTGGGGCGGGCTGAGCGAGCGG 7044 Query 42981 GAACGCCGC 42989 || |||||| Sbjct 7045 GAGCGCCGC 7053 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 177538334364468