Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= NC_030953.1 Length=170650 Score E Sequences producing significant alignments: (Bits) Value seq2006 82.4 8e-11 seq5 82.4 8e-11 >seq2006 Length=8692 Score = 82.4 bits (90), Expect = 8e-11 Identities = 56/63 (89%), Gaps = 0/63 (0%) Strand=Plus/Minus Query 16947 GGAATCGAACCGCCGACCTTCTCATTACAAGTGAGTTGCTCTACCTACTGAGCTAAATCA 17006 ||||||||||| |||||||||||||||||||||| ||||||||| ||||||||| | | Sbjct 5960 GGAATCGAACCCTCGACCTTCTCATTACAAGTGAGCTGCTCTACCAACTGAGCTACACCG 5901 Query 17007 GCG 17009 ||| Sbjct 5900 GCG 5898 >seq5 Length=148305 Score = 82.4 bits (90), Expect = 8e-11 Identities = 56/63 (89%), Gaps = 0/63 (0%) Strand=Plus/Plus Query 17110 GCGGCAGGATTTGAACCTGCGACATTCTGCTCCCAAAGCAGACGCTCTACCAAACTGAGC 17169 ||| ||||||||||||||||||| | | ||||||||||| | ||||||||||| |||||| Sbjct 79704 GCGACAGGATTTGAACCTGCGACTTCCCGCTCCCAAAGCGGGCGCTCTACCAAGCTGAGC 79763 Query 17170 TAC 17172 ||| Sbjct 79764 TAC 79766 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 545897411624400