Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= NC_031048.1 Length=41918 Score E Sequences producing significant alignments: (Bits) Value seq1581 89.7 1e-13 >seq1581 Length=10720 Score = 89.7 bits (98), Expect = 1e-13 Identities = 179/261 (69%), Gaps = 7/261 (3%) Strand=Plus/Minus Query 26926 GATTTCAGTGGTGTAGCGCTCAACGCCT---TGCTGATCAGTCCATTTACGGGTTCGCAG 26982 |||||| ||| ||||||| ||| |||| | || || ||| || ||||| ||| Sbjct 10589 GATTTCGGTGCTGTAGCGGTCAGCGCCGGTGTCCTTGTCTTGCCACTTGCGGGTCTTCAG 10530 Query 26983 ACCGCCTTCAATGAACACCTTGCTGCCTTTGCGCAGGTATTCACCAGCGATTTCCGCCAG 27042 | ||| || ||| | ||| || ||| || ||||||||| || |||||||| ||||| Sbjct 10529 GCGGCCCTCGATGTAGACCGAGCGGCCCTTCTTCAGGTATTCGCCGGCGATTTCGGCCAG 10470 Query 27043 CTTGCCGAAGATGACAACGCGGTGCCATTCCGTCTGCTCTTTTGGTTCGCCTGTGGCCTT 27102 | | | ||||| |||||||||||||| || | || ||||||| | ||||| Sbjct 10469 GCGGTTGTACATGACCACGCGGTGCCATTCGGTTTCTTCGCGGCGTTCGCCCGATGCCTT 10410 Query 27103 ATCTTTCCACTTTTCGGTTGTGGCAATGCTGAGAT-TGGCA-ACTGCGCCACCTGACGGC 27160 || ||||| | ||| ||||| ||| || || | ||| | |||| | || || Sbjct 10409 GTCCTTCCAGGTGGAGGTCGTGGCGATG--GACATGTTGCAGATTGCGGCCCCGTCGGGG 10352 Query 27161 ATGTAGCGCACTTCTGGATCG 27181 ||||||| ||||| || ||| Sbjct 10351 CTGTAGCGGACTTCCGGGTCG 10331 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 134003270071440