Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= NC_031074.1 Length=92580 Score E Sequences producing significant alignments: (Bits) Value seq180 122 5e-23 seq2405 86.0 4e-12 >seq180 Length=35712 Score = 122 bits (134), Expect = 5e-23 Identities = 188/258 (73%), Gaps = 8/258 (3%) Strand=Plus/Minus Query 3461 GCTCGACCCGCACGTGGGTGTGATCTACGGCGATTCGATCACCCTGAATCG-GGCGGCGT 3519 ||| ||||||||||| || |||||||||||||||| ||||| ||| || ||| ||| Sbjct 29162 GCTGGACCCGCACGTCGGCCTGATCTACGGCGATTCCATCACGCTGGCGCGTGGCCGCGA 29103 Query 3520 CGATCACCGGT-CGGCTCG-CTGAGATGGGTTACGCGTCCACGAACGTCGTTTTCGGCGT 3577 | ||| | ||| ||| | | || | ||||| |||||| ||||| || | ||| | Sbjct 29102 C-ATC-CTGGTGCGGTTGGAAAGAAAGGGGTT-TGCGTCCGGCAACGTGGTCCTGGGCAT 29046 Query 3578 CGGCTCGTACACGTACCAGTACAACACCCGGGACACGTTCGGCAGCGCCATGAAGGCCAC 3637 |||||| ||||| ||||| ||| ||||| |||| |||||| | || | ||||| || Sbjct 29045 CGGCTCCTACACCTACCAATACCTGACCCGCGACAGCTTCGGCTGGGCGCTCAAGGCGAC 28986 Query 3638 GTGGGCCGAGGTGGACGGTG-AGGGCGTGAACCTGCTCAAGGACCCGATCACCGACGACG 3696 || |||||||| | || | | || ||| ||| | ||||||||| | |||||| || Sbjct 28985 GTACGCCGAGGTCAATGGCGAACCGCAGGAA-CTGGTGAAGGACCCGGTGACCGACTCCG 28927 Query 3697 GAACGAAGCGCTCGGCCA 3714 | |||||| ||||||| Sbjct 28926 GCGTGAAGCGTTCGGCCA 28909 >seq2405 Length=7261 Score = 86.0 bits (94), Expect = 4e-12 Identities = 121/167 (72%), Gaps = 5/167 (3%) Strand=Plus/Minus Query 41814 TTCAGCGGCGAGAAGATCGTGCGCGCCGCGATCTCCTGCA-CCACGCCTGTCGTCTCGGC 41872 ||||||| ||| |||||||||| | | | | ||| |||| || |||||| || Sbjct 527 TTCAGCGACGAACGCCTCGTGCGCGCGGTGGCCGCG-GCATCCACCCCCGTCGTCAGTGC 469 Query 41873 CATCGGCCACGAGCCTGACAATCCCGTCCTGGACGACGTCGCCGACTTCCGAGCCGCAAC 41932 ||||| |||||| || |||| |||| ||||| ||||| ||| | || ||| | || Sbjct 468 GATCGGGCACGAGAACGATCATCCGATCCTCGACGATGTCGCGGACCTGCGCGCCTCGAC 409 Query 41933 ACCGACCGACGCCGCGAAGAACGTCGTGCCCGACATGGTCGCCGAGC 41979 ||||| || ||||| ||| ||||||||||||| |||| ||||| Sbjct 408 GCCGACGGATGCCGCCAAGCGCGTCGTGCCCGAC---GTCGGCGAGC 365 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 296102330817099