Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= NC_031080.1 Length=160985 Score E Sequences producing significant alignments: (Bits) Value seq688 89.7 5e-13 seq706 87.8 2e-12 seq4104 86.0 6e-12 >seq688 Length=19146 Score = 89.7 bits (98), Expect = 5e-13 Identities = 106/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 120467 GGGCCGGGCCGTGGATCCGCCGGAGGCTCGCTGGTCACCTACGTCATGGGCATCACCTCG 120526 || |||||||| || |||| || ||||| ||| | |||| | ||| |||||||| Sbjct 4307 GGTCCGGGCCGCGGGTCCGGCGCGGGCTCCATGGCCGCCTATGCGATGCGCATCACCGAC 4366 Query 120527 ATCGATCCGATCAAGTACGACCTGATGTTCGAGCGCTTCATCAACCCGGATCGCCCCGAC 120586 |||| ||| | || ||| ||||| |||||||| ||| ||||||| || || | | Sbjct 4367 CTCGACCCGCTGCAGCACGGTCTGATCTTCGAGCGGTTCCTCAACCCCGACCGTGTCTCC 4426 Query 120587 TTTCCCGACATCGACGTCGACTTC 120610 | |||||| |||||||||||||| Sbjct 4427 ATGCCCGACTTCGACGTCGACTTC 4450 >seq706 Length=18769 Score = 87.8 bits (96), Expect = 2e-12 Identities = 135/186 (73%), Gaps = 9/186 (5%) Strand=Plus/Plus Query 43762 GGGCTGATCAACGCCCTGATGCGCGACCGTCACGGCACCCCGTTCGAGCACATGAACGC- 43820 || || |||||| |||||||||||||||||||||| | ||||||||||||| ||| Sbjct 2717 GGCCTCATCAACTACCTGATGCGCGACCGTCACGGCTCGCCGTTCGAGCACA-ACTCGCT 2775 Query 43821 CACCTTCCGGGTCACCGCCCCGATCTTTGTCTGGCGCGAGCATCA-CCGTCACAG-GTCG 43878 ||||||| || || || ||||| || | |||||| ||| || ||| | ||| Sbjct 2776 CACCTTCTACGTGCAGGCGCCCATCTTCGTGTTCCGCGAG-TTCATGCGCCACCGCATCG 2834 Query 43879 GGGTGGAGCTACAACGAGGAGAGTGGGCGCTACAAGCAGCTCGATCCGGTCTTCTACGTG 43938 |||||||||||||||| || |||||| |||| |||||| ||||||||| Sbjct 2835 ----CGAGCTACAACGAGGAGTCGGGCCGCTACCGCGAGCTGCGTCCGGTGTTCTACGTG 2890 Query 43939 TGCGGC 43944 |||| Sbjct 2891 CCCGGC 2896 >seq4104 Length=3717 Score = 86.0 bits (94), Expect = 6e-12 Identities = 88/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 120505 CTACGTCATGGGCATCACCTCGATCGATCCGATCAAGTACGACCTGATGTTCGAGCGCTT 120564 |||||| | ||| |||||||| ||||||||| |||| ||| ||| ||||||||||||| Sbjct 1248 CTACGTGCTCGGCGTCACCTCGGTCGATCCGACCAAGGTCGATCTGCTGTTCGAGCGCTT 1307 Query 120565 CATCAACCCGGATCGCCCCGACTTTCCCGACATCGACGTCGACTTCCAGAAGTCG 120619 |||| | ||| || || ||||||||||||||||| ||| || | ||| Sbjct 1308 CATCTCCAAGGAGCGGTTGGAGCCGCCCGACATCGACGTCGATTTCGAGCATTCG 1362 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 514972504037800