Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= NC_031129.1 Length=103445 Score E Sequences producing significant alignments: (Bits) Value seq4108 271 5e-68 >seq4108 Length=3714 Score = 271 bits (300), Expect = 5e-68 Identities = 668/988 (68%), Gaps = 40/988 (4%) Strand=Plus/Plus Query 58583 TAATCGCCGGTTAGGTTGATGTGCTCCCAGCCCAGCGGCG--ACAGGAATTGC-AGCAGC 58639 || |||||||| ||| |||||||||||| |||||||||| ||| | || || || Sbjct 110 TAGTCGCCGGTGAGGCCGATGTGCTCCCATCCCAGCGGCGCGACATGG---GCGAGTAGT 166 Query 58640 TCGCCGTCCACCGGCTTGCCGGCCTCGACCAACCCCTGGGTGGCGCGTTCCAGGTACACC 58699 ||| || |||| ||| || || | || ||||| || || || ||| Sbjct 167 TCGTCGGGCACCTCGACACCGCTGGCGCGCAGATGCCGGACCGCGCGGTCGAGATAGACC 226 Query 58700 GTGTTCCACAGCACGATAGCCGCCGTCACCAGGTTGAGGCCGCTGGCCCGGTAGCGCTGC 58759 |||||||| || || ||||| || | ||| | || ||| ||| || | |||||| Sbjct 227 GTGTTCCAGAGGGTGACGGCCGCGGTGAGAAGGGTCAGCCCGGAGGCACGATGGCGCTGG 286 Query 58760 TGCTCGAAGCTCCGATCCCTGATTTCCCCAAGGCGGTTGAAGAACACCGCCCTGGCCAGC 58819 | |||||| | || || | | ||| || ||||||||||| || | || | ||| ||| Sbjct 287 TTCTCGAATGTGCGGTCGCGCAATTCGCCGAGGCGGTTGAAAAAGATGGCGCGGGCGAGC 346 Query 58820 GAGTTGCGCGCCTCACCTTTGTTCAGGCCGGCATGC--ACGCGGCGGCGCAGTTCAACAC 58877 | ||||| || ||||| ||||| ||| | ||| ||| || ||| |||| | Sbjct 347 GCATTGCGGGCTTCACCCTTGTTGAGGATG--CTGCCGGTGCGACGCCGCTGTTCGGGAT 404 Query 58878 TTTGCAGCCAGTCCAGGATGAACAGCGTGCGCTCGATCCGGCCCAGCTCGCGCA--GGGC 58935 | | | |||||| || |||||||| |||||||||||||| || |||||||||| | || Sbjct 405 TGTTGAACCAGTCGAGCATGAACAGGGTGCGCTCGATCCGCCCGAGCTCGCGCAATGCGC 464 Query 58936 CA-CGGCCAGTCCGTTCTGGCGCGG-GTAGCTGCCGAGCTTGCGCAGCATCAGCGAGGCG 58993 | || || | ||| || ||||| | ||||| |||||||||||||| | ||| ||| Sbjct 465 GAGCGACCGG---GTTTTGACGCGGAAAACCTGCC-AGCTTGCGCAGCATGACCGACGCG 520 Query 58994 GTGACGGTGCCCTGCTTGATCGAGCTGGCCAGGCGCAGGATGTCGTCCCAGT-GGGCACG 59052 ||||||||||| | ||||||| ||| || ||||| | |||||||| | | | || Sbjct 521 CTGACGGTGCCCGCCCGGATCGAGGCGGCGAGCCGCAGCGTCTCGTCCCAATCCGCCTCG 580 Query 59053 CACGTGCTTGATGTTCAGGGTGCCGCCGATCAGCGGGCGCAACGTCGGGTA-GGCTTGCA 59111 || || || ||| | | || | | | |||||||||| || || | || | | Sbjct 581 ATCGCGC-GGACGTTGACCGGGCGGGCTACGAGCGGGCGCAGTGTGGGCCAGGGGTCGAG 639 Query 59112 CGCCCTGCGGCACGTACAGCTTGGTTTCGCCGAGGTCGCGGATGCGCGGCGCGAAGCGGA 59171 || | ||| ||| ||| | ||| |||||| ||||| ||||| |||||||||| Sbjct 640 CGACGACAGGC-TGTAGAGCCGGCGCTCGTTGAGGTCACGGATACGCGGTGCGAAGCGGA 698 Query 59172 AGCCTAGCAGGT-GCATCAGGGCAAAGACGTGATCGGTGAAGCCGGCCGTGTCGGTGTAG 59230 |||| ||||||| |||| ||| | || ||||||||| ||||| ||||||||| Sbjct 699 AGCCGAGCAGGTGGCAT-AGGCCGAAAACGTGATCGACCGCCCCGGCGGTGTCGGTGGCA 757 Query 59231 TGCTCCTCGATCCGCAGGTCGGACTCGTGGTACAGCAGGCCGTCGAGCACATAGGTGGAA 59290 || || ||| ||| ||| ||| |||| |||||||| ||||| || | | || Sbjct 758 TGTTCGCGGATTACCAGCTCGCTCTCATGGTCGAGCAGGCCATCGAGGACGTGCGCGGCC 817 Query 59291 TCGCGGAC---GCCGACATTCACCACGCGGGTGCTGAACGGCGCGTACTGGTCGGAGATA 59347 |||| | | | | || | ||| |||| |||||||| | | |||||| || Sbjct 818 TCGCCGGCATTGGCTGCAATGACC---TTGGTGTGGAACGGCGTGAAGCGGTCGGTGACG 874 Query 59348 TGGGTATAGAACAGCCGTCCCGGCTCGCTACCGTACTTCGGG--TTGACGTGCCCGGTGC 59405 ||||| ||||||||| || || ||| | ||||| |||| ||| | || | Sbjct 875 TGGGTGTAGAACAGCACGCCGGGATCGGTGCCGTA--GCGGGCATTGCGATCGGCGCGAC 932 Query 59406 TCTCGCCCCGGCCACCCGCGCGGAAGCGCTGGCCATCGGAGGATGAGGTCGTGCCGTCGC 59465 ||||||| | || || ||||||||| ||| ||||| || || || || ||| | Sbjct 933 CCTCGCCCTGACCGCCGGCGCGGAAGAACTGTCCATCCGACGACGACGTGTCGCCCGGTC 992 Query 59466 CCCAG---TGGGCGGCAAAGGCGTGGCGATACTGGTGGTTGACCAGCTCGGCCAAGGCCG 59522 ||||| |||||| | ||| ||| || ||| || || | | | |||| |||| Sbjct 993 CCCAGACCTGGGCG--AGAGGATGCGCGGTA-TGGCAGTCAACGATCGCCGCCAGCGCCG 1049 Query 59523 CCGAATAGGTTTCGTCGCGGATGTGCCA 59550 | ||||||||||||||| | ||||| Sbjct 1050 ACAGATAGGTTTCGTCGCGCACATGCCA 1077 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 330866941360834