Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= NC_031252.1 Length=51290 Score E Sequences producing significant alignments: (Bits) Value seq5 154 5e-33 >seq5 Length=148305 Score = 154 bits (170), Expect = 5e-33 Identities = 258/365 (71%), Gaps = 6/365 (2%) Strand=Plus/Minus Query 30892 GAAATAATGGCCGGTGAAACAACGATCACAGTGATCGGAAACCTGACGAACGATCCAGAG 30951 ||| | |||||||| || || ||||| || | || ||||| ||| ||| || ||| Sbjct 31319 GAACTGATGGCCGGCGAGACCGTCATCACCGTCGTGGGCAACCTCACGGCCGACCCCGAG 31260 Query 30952 CTACGGTTCACGCCGT-CTGGCAGCGCTGTCGCGAACTTCACGATCGCGAGCACACCGCG 31010 || |||| ||||| | | ||| || | |||||||||||||| |||||| || || || Sbjct 31259 CTGCGGTACACGCAGAACGGGCTGCCC-GTCGCGAACTTCACCATCGCGTCGACCCCCCG 31201 Query 31011 AACGTTCGATCGACAGTCAAACGAGTGGAAAGACGGCGAGACGCTCTTCCTGCGCGCTGC 31070 |||||||| || ||| | ||||||||||| ||||||||| | || |||||||| || | Sbjct 31200 CACGTTCGACCGTCAGGCGAACGAGTGGAAGGACGGCGAGGCCCTGTTCCTGCGGGCGTC 31141 Query 31071 TGTCTGGCGCGAGACTGCAGAGAATGTCGCAGAGTCCCTGCAGAAGGGCATGGAGGTCAT 31130 |||||||| ||| || ||| | || || | || ||| ||||||| ||||| Sbjct 31140 GGTCTGGCGTGAGTTCGCCGAGCACGTGGCGGGTTCGCTGACCAAGGGCAGCCGTGTCAT 31081 Query 31131 CTGCG-TCGGGCGTCTGAAGTC-GCGCAGCTACGAGACGAAAGAGGGCGAGAAGCGCACT 31188 | ||| ||| |||||| ||| |||| |||| || || || ||| ||||| Sbjct 31080 C-GCGACCGGTCGTCTG-CGTCAGCGCTCCTACCAGGACCGTGACGGGCAGACCCGCACC 31023 Query 31189 GTCATCGAGCTCGAAGTCGACAGCATCGGCCCGTCGCTGCGATGGGCGTCTGCGGCGATG 31248 | |||||| ||||| || ||| ||||||||| || || | ||| | ||| || || Sbjct 31022 GCCATCGAACTCGAGGTGGACGAGATCGGCCCGAGCCTCCGCTACGCGACCGCGACGGTG 30963 Query 31249 AAGCG 31253 |||| Sbjct 30962 CAGCG 30958 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 163990821339576