Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq7728 150 2e-31 seq1176 120 3e-22 seq1162 111 1e-19 seq1233 105 6e-18 seq12 105 6e-18 seq585 98.7 9e-16 seq73 96.9 3e-15 seq3338 84.2 2e-11 >seq7728 Length=1087 Score = 150 bits (166), Expect = 2e-31 Identities = 172/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 41633 CCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCG 41692 || ||||| || || || | ||||| |||| ||| ||||||||||||||| ||||| Sbjct 277 CCTCCGCCTCGCAGGCGCAGAACCAGGTGCAATGTGGACTCCTTCTGAATGTTGTAGTCC 218 Query 41693 GAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCG 41752 || || ||||| |||| || ||||||||||| || || || |||||||| || || | | Sbjct 217 GAAAGCGTGCGGCCGTCCTCCAGCTGCTTGCCCGCAAAGATGAGGCGCTGCTGATCAGGG 158 Query 41753 GGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCC 41812 || | | ||||||||| ||| |||||||||| | | |||||||| | ||| Sbjct 157 GGGATCCCTTCCTTGTCCTGGATCTTTTGCTTCACATTCTCGATTGTGTCGCTGGGCTCA 98 Query 41813 ACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 || || | || || || || |||||||| ||||| ||||| ||||||||| Sbjct 97 ACATCTAGGGTGATGGTCTTGCCCGTCAGGGTCTTGACGAAGATCTGCATG 47 >seq1176 Length=13603 Score = 120 bits (132), Expect = 3e-22 Identities = 108/136 (79%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||||||||| || || | |||||| || || ||| ||||||||| ||||| ||||| | Sbjct 13253 GCCGCCGCGCAGGCGCAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGC 13312 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 |||||||| | || || ||||||||||| || || ||||||||||| ||||| | ||| Sbjct 13313 CAGGGTGCGGCCATCCTCCAGCTGCTTGCCCGCAAAAATCAGGCGCTGCTGGTCAGGGGG 13372 Query 41755 AACGCTCTCCTTGTCC 41770 | || |||||||||| Sbjct 13373 GATGCCCTCCTTGTCC 13388 Score = 114 bits (126), Expect = 1e-20 Identities = 107/136 (79%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 |||||| || || || | |||||| || || ||| ||||||||| ||||| ||||| | Sbjct 12494 GCCGCCACGCAGGCGCAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGC 12553 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 |||||||| | || || ||||||||||| || || ||||||||||| ||||| | || Sbjct 12554 CAGGGTGCGGCCATCCTCCAGCTGCTTGCCCGCAAAAATCAGGCGCTGCTGGTCAGGAGG 12613 Query 41755 AACGCTCTCCTTGTCC 41770 || || |||||||||| Sbjct 12614 AATGCCCTCCTTGTCC 12629 >seq1162 Length=13745 Score = 111 bits (122), Expect = 1e-19 Identities = 106/136 (78%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 |||||| || || || | |||||| || || ||| |||||| || ||||| ||||| | Sbjct 13605 GCCGCCACGCAGGCGAAGCACCAGGTGGAGGGTGGACTCCTTTTGGATGTTGTAGTCAGC 13664 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 ||||||||| | || || ||||||||||| || || ||||| ||||| ||||| | || Sbjct 13665 CAGGGTGCGCCCATCCTCAAGCTGCTTGCCCGCAAAGATCAGACGCTGCTGGTCGGGAGG 13724 Query 41755 AACGCTCTCCTTGTCC 41770 || || |||||||||| Sbjct 13725 AATGCCCTCCTTGTCC 13740 >seq1233 Length=13172 Score = 105 bits (116), Expect = 6e-18 Identities = 91/113 (81%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| ||||| || || | |||||| ||||||||| ||| ||||| ||||| || |||| Sbjct 13060 GCCACCGCGCAGGCGCAGCACCAGGTGCAGCGTGGACTCTTTCTGGATGTTGTAATCGGC 13119 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGT 41747 |||||||| |||| || ||||||||||| || || ||||||||||| |||| Sbjct 13120 AAGGGTGCGGCCGTCCTCCAGCTGCTTGCCCGCAAAGATCAGGCGCTGCTGGT 13172 >seq12 Length=84225 Score = 105 bits (116), Expect = 6e-18 Identities = 105/136 (77%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 |||||| || || || | ||||| || || ||| |||||| || ||||| ||||| | Sbjct 45 GCCGCCACGCAGGCGAAGCACCAAGTGGAGGGTGGACTCCTTTTGGATGTTGTAGTCAGC 104 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 ||||||||| | || || ||||||||||| || || ||||| ||||| ||||| | || Sbjct 105 CAGGGTGCGCCCATCCTCAAGCTGCTTGCCCGCAAAGATCAGACGCTGCTGGTCGGGAGG 164 Query 41755 AACGCTCTCCTTGTCC 41770 || || |||||||||| Sbjct 165 AATGCCCTCCTTGTCC 180 >seq585 Length=20866 Score = 98.7 bits (108), Expect = 9e-16 Identities = 95/122 (78%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| ||||| || || | |||||| || || ||| ||||||||| ||||| ||||| | Sbjct 670 GCCACCGCGCAGGCGCAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGC 729 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 |||||||| | || || ||||||||||| || || ||||||||||| ||||| | || Sbjct 730 CAGGGTGCGGCCATCCTCCAGCTGCTTGCCCGCAAAAATCAGGCGCTGCTGGTCAGGAGG 789 Query 41755 AA 41756 || Sbjct 790 AA 791 >seq73 Length=47289 Score = 96.9 bits (106), Expect = 3e-15 Identities = 103/136 (76%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 |||||| || || || | ||||| || |||||| ||| ||||| ||| | ||||||| Sbjct 32399 GCCGCCACGCAGGCGCAGTACCAGGTGAAGCGTGGACTCTTTCTGGATGCTGTAGTCGGC 32458 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 |||||||| | || || ||||||||||| | ||| || | |||||| ||||| | || Sbjct 32459 CAGGGTGCGGCCATCCTCAAGCTGCTTGCCCGTGAAGATTAAGCGCTGCTGGTCGGGAGG 32518 Query 41755 AACGCTCTCCTTGTCC 41770 | || |||||||||| Sbjct 32519 GATGCCCTCCTTGTCC 32534 >seq3338 Length=4919 Score = 84.2 bits (92), Expect = 2e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 ||||| || || || | |||||| ||||| ||| ||||||||| ||||| || |||| Sbjct 4816 CCGCCCCGCAGGCGCAGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAATCGGCC 4875 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCG 41739 |||||||| | || || ||||||||||| || || || ||||| Sbjct 4876 AGGGTGCGGCCATCCTCAAGCTGCTTGCCCGCAAAGATGAGGCG 4919 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462257775378800