Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gonium_20pectorale_20[genbank_20GCA_5F001584585.1_202016-03-09] 2,373 sequences; 148,806,073 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq19 107 1e-18 seq20 96.9 2e-15 >seq19 Length=1619492 Score = 107 bits (118), Expect = 1e-18 Identities = 92/114 (81%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 ||||| ||||| | |||||||||||| | || || || ||||| ||||||||||||| Sbjct 1128765 CCGCCTCGCAGGCGCAGCACCAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGCG 1128706 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCG 34276 ||| || |||| |||| ||||||||| ||||| ||||| |||||||||||| Sbjct 1128705 AGCGTGCGCCCGTCCTCCAGCTGCTTGCCCGCGAAGATGAGGCGCTGCTGGTCG 1128652 Score = 95.1 bits (104), Expect = 8e-15 Identities = 81/100 (81%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 34177 CAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTC 34236 |||||||||||| | || || || ||||| ||||||||||||| ||| || |||| Sbjct 1129591 CAGCACCAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGCCCGTC 1129532 Query 34237 GTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCG 34276 |||| ||||||||| ||||| ||||| |||||||||||| Sbjct 1129531 CTCCAGCTGCTTGCCCGCGAAGATGAGGCGCTGCTGGTCG 1129492 >seq20 Length=1589639 Score = 96.9 bits (106), Expect = 2e-15 Identities = 89/113 (79%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || |||||||| | |||||||||||| | || || || ||||| ||||||||||| | Sbjct 962734 CCACCGCGCAGGCGCAGCACCAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCAGCG 962793 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC 34275 ||| || |||| |||| ||||||||| ||||| || || ||||||||||| Sbjct 962794 AGCGTGCGCCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTC 962846 Score = 96.9 bits (106), Expect = 2e-15 Identities = 89/113 (79%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || |||||||| | |||||||||||| | || || || ||||| ||||||||||| | Sbjct 965381 CCACCGCGCAGGCGCAGCACCAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCAGCG 965440 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC 34275 ||| || |||| |||| ||||||||| ||||| || || ||||||||||| Sbjct 965441 AGCGTGCGCCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTC 965493 Score = 96.9 bits (106), Expect = 2e-15 Identities = 89/113 (79%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || |||||||| | |||||||||||| | || || || ||||| ||||||||||| | Sbjct 965814 CCACCGCGCAGGCGCAGCACCAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCAGCG 965873 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC 34275 ||| || |||| |||| ||||||||| ||||| || || ||||||||||| Sbjct 965874 AGCGTGCGCCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTC 965926 Score = 96.9 bits (106), Expect = 2e-15 Identities = 89/113 (79%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || |||||||| | |||||||||||| | || || || ||||| ||||||||||| | Sbjct 966247 CCACCGCGCAGGCGCAGCACCAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCAGCG 966306 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC 34275 ||| || |||| |||| ||||||||| ||||| || || ||||||||||| Sbjct 966307 AGCGTGCGCCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTC 966359 Score = 96.9 bits (106), Expect = 2e-15 Identities = 89/113 (79%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || |||||||| | |||||||||||| | || || || ||||| ||||||||||| | Sbjct 968234 CCACCGCGCAGGCGCAGCACCAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCAGCG 968293 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC 34275 ||| || |||| |||| ||||||||| ||||| || || ||||||||||| Sbjct 968294 AGCGTGCGCCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTC 968346 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323062656454880