Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gonium_20pectorale_20[genbank_20GCA_5F001584585.1_202016-03-09]
2,373 sequences; 148,806,073 total letters
Query= NC_002816.1
Length=123500
Score E
Sequences producing significant alignments: (Bits) Value
seq20 84.2 2e-11
>seq20
Length=1589639
Score = 84.2 bits (92), Expect = 2e-11
Identities = 79/101 (78%), Gaps = 0/101 (0%)
Strand=Plus/Plus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||| |||||| |||||||||||||| ||||||||||| || ||| |||| |||
Sbjct 962752 ACCAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCAGCGAGCGTGCGCCCGTCCTCC 962811
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGG 45228
|| || || |||||||| |||| ||||| ||||| || ||
Sbjct 962812 AGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGG 962852
Score = 84.2 bits (92), Expect = 2e-11
Identities = 79/101 (78%), Gaps = 0/101 (0%)
Strand=Plus/Plus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||| |||||| |||||||||||||| ||||||||||| || ||| |||| |||
Sbjct 965399 ACCAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCAGCGAGCGTGCGCCCGTCCTCC 965458
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGG 45228
|| || || |||||||| |||| ||||| ||||| || ||
Sbjct 965459 AGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGG 965499
Score = 84.2 bits (92), Expect = 2e-11
Identities = 79/101 (78%), Gaps = 0/101 (0%)
Strand=Plus/Plus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||| |||||| |||||||||||||| ||||||||||| || ||| |||| |||
Sbjct 965832 ACCAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCAGCGAGCGTGCGCCCGTCCTCC 965891
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGG 45228
|| || || |||||||| |||| ||||| ||||| || ||
Sbjct 965892 AGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGG 965932
Score = 84.2 bits (92), Expect = 2e-11
Identities = 79/101 (78%), Gaps = 0/101 (0%)
Strand=Plus/Plus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||| |||||| |||||||||||||| ||||||||||| || ||| |||| |||
Sbjct 966265 ACCAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCAGCGAGCGTGCGCCCGTCCTCC 966324
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGG 45228
|| || || |||||||| |||| ||||| ||||| || ||
Sbjct 966325 AGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGG 966365
Score = 84.2 bits (92), Expect = 2e-11
Identities = 79/101 (78%), Gaps = 0/101 (0%)
Strand=Plus/Plus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||| |||||| |||||||||||||| ||||||||||| || ||| |||| |||
Sbjct 968252 ACCAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCAGCGAGCGTGCGCCCGTCCTCC 968311
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGG 45228
|| || || |||||||| |||| ||||| ||||| || ||
Sbjct 968312 AGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGG 968352
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 395063774054833
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |