Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gonium_20pectorale_20[genbank_20GCA_5F001584585.1_202016-03-09] 2,373 sequences; 148,806,073 total letters Query= NC_005336.1 Length=139962 Score E Sequences producing significant alignments: (Bits) Value seq239 87.8 2e-12 >seq239 Length=30718 Score = 87.8 bits (96), Expect = 2e-12 Identities = 92/120 (77%), Gaps = 2/120 (2%) Strand=Plus/Plus Query 5374 TCCGAA--GTTAAACAGCACCACCCCGACATTGCCTCGGTAGTCTTCGTCGATAACGCCA 5431 |||||| ||| ||||||| || || || ||||| |||||||| ||||| | |||||| Sbjct 19989 TCCGAATGGTTGAACAGCAGGACGCCCACGTTGCCGCGGTAGTCCTCGTCCACGACGCCA 20048 Query 5432 GCGCCCACGTCGATAAAGTGTTTGACCGCAAGGCCGGAACGTGGTGCTATGCGTCCGTAG 5491 ||||| |||||| |||| || || || ||||| || || ||||| | ||| |||||| Sbjct 20049 GCGCCAGTGTCGATGAAGTTCTTCACGGCCAGGCCTGAGCGCGGTGCCACGCGGCCGTAG 20108 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447737118603760