Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gonium_20pectorale_20[genbank_20GCA_5F001584585.1_202016-03-09] 2,373 sequences; 148,806,073 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq239 127 2e-24 >seq239 Length=30718 Score = 127 bits (140), Expect = 2e-24 Identities = 111/136 (82%), Gaps = 4/136 (3%) Strand=Plus/Plus Query 5622 CCTCGAAATCGTTGTGGCCGAA--GTTGAACAGCACCACGCCCACGTTGCCGCGGTAGTC 5679 || |||| || | || ||||| ||||||||||| ||||||||||||||||||||||| Sbjct 19975 CCACGAAGTCCTCGT--CCGAATGGTTGAACAGCAGGACGCCCACGTTGCCGCGGTAGTC 20032 Query 5680 GGCGTCTATCACGCCCGCGCCCACGTCGATGAAGTGCTTGACCGCCAGGCCGGAGCGGGG 5739 |||| | ||||| ||||| ||||||||||| ||| || |||||||| ||||| || Sbjct 20033 CTCGTCCACGACGCCAGCGCCAGTGTCGATGAAGTTCTTCACGGCCAGGCCTGAGCGCGG 20092 Query 5740 AGCCACGCGGCCGTAG 5755 ||||||||||||||| Sbjct 20093 TGCCACGCGGCCGTAG 20108 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430041962423576