Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gonium_20pectorale_20[genbank_20GCA_5F001584585.1_202016-03-09] 2,373 sequences; 148,806,073 total letters Query= NC_008187.1 Length=191100 Score E Sequences producing significant alignments: (Bits) Value seq44 100 3e-16 seq144 96.9 4e-15 >seq44 Length=922537 Score = 100 bits (110), Expect = 3e-16 Identities = 144/198 (73%), Gaps = 4/198 (2%) Strand=Plus/Plus Query 126181 GTGTAAATGTAGCGGGGAGCTGCCGA-ATCCTTGCCTCCCTCCAACCGCGTGCCAAACTG 126239 ||||| |||||||| | |||| || ||||||||| |||| || ||| || || ||||| Sbjct 37788 GTGTAGATGTAGCGTGC-GCTGGCGGCATCCTTGCCGCCCTGCAGCCGGGTACCGAACTG 37846 Query 126240 ACCGTCCGGCTCCAACAACTGCACATTGTTGGCTCCCACAAAGTCCTGCGCAAACTTGAC 126299 ||| ||| | || || | || |||||| ||||| |||||||| || | || || Sbjct 37847 GCCGCTCGGGTGCAGCAGGTTGACGTTGTTGCTGCCCACGAAGTCCTGGGCCAGGTTCAC 37906 Query 126300 AATGGT-CTCGCACAGGTTCTGCTCGCCGTGCTTGTAGTCGGTCTGCTCGGCCACGTAGC 126358 ||| | ||||| || ||||||||||||| | ||| | | |||||||| ||||| Sbjct 37907 AATTGCGCTCGC-CAAACTCTGCTCGCCGTGGTGGTACGCCGAGTGCTCGGCTACGTAAG 37965 Query 126359 CGCTCAGCTGCGCAACCT 126376 || |||||| || |||| Sbjct 37966 CGGACAGCTGGGCCACCT 37983 >seq144 Length=117093 Score = 96.9 bits (106), Expect = 4e-15 Identities = 114/152 (75%), Gaps = 2/152 (1%) Strand=Plus/Minus Query 15048 CGCCCGAGATTGGCGACAAGTTTTGCTCTGGT-ATGGCGCAAAAGGGCACGTGCGGCATG 15106 |||| || | ||||||||||| ||| | | ||| || ||||||||||||||||| Sbjct 86055 CGCCGTAGGTGGGCGACAAGTTCGCCTCGCGCCACGGC-CAGAAGGGCACGTGCGGCATC 85997 Query 15107 ATTTTCCCCCAGGAAGACATGCCCTTTACCGCGTCAGGCATGACGCCCGACATTATCATC 15166 | | | | ||| ||||||||||| || ||| ||||| ||| ||||| ||| || Sbjct 85996 ACGTACACGATGGAGGACATGCCCTTCACGGCGGAGGGCATCGTGCCGGACATCATCGTC 85937 Query 15167 AACCCCAACTGCATCCCGTCCCGCATGACCAT 15198 ||||| || ||||||||||||||||||||| Sbjct 85936 AACCCGCACGCCATCCCGTCCCGCATGACCAT 85905 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 611373864584800