Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gonium_20pectorale_20[genbank_20GCA_5F001584585.1_202016-03-09]
2,373 sequences; 148,806,073 total letters
Query= NC_009503.1
Length=124121
Score E
Sequences producing significant alignments: (Bits) Value
seq20 102 6e-17
seq19 98.7 8e-16
>seq20
Length=1589639
Score = 102 bits (112), Expect = 6e-17
Identities = 91/114 (80%), Gaps = 0/114 (0%)
Strand=Plus/Plus
Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960
|| || | ||| ||||||||||| || || |||||||||||||| |||||||| || ||
Sbjct 962734 CCACCGCGCAGGCGCAGCACCAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCAGCG 962793
Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCC 34014
| ||| |||| |||| ||||||||||| || |||||||||||||| |||
Sbjct 962794 AGCGTGCGCCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCC 962847
Score = 102 bits (112), Expect = 6e-17
Identities = 91/114 (80%), Gaps = 0/114 (0%)
Strand=Plus/Plus
Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960
|| || | ||| ||||||||||| || || |||||||||||||| |||||||| || ||
Sbjct 965381 CCACCGCGCAGGCGCAGCACCAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCAGCG 965440
Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCC 34014
| ||| |||| |||| ||||||||||| || |||||||||||||| |||
Sbjct 965441 AGCGTGCGCCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCC 965494
Score = 102 bits (112), Expect = 6e-17
Identities = 91/114 (80%), Gaps = 0/114 (0%)
Strand=Plus/Plus
Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960
|| || | ||| ||||||||||| || || |||||||||||||| |||||||| || ||
Sbjct 965814 CCACCGCGCAGGCGCAGCACCAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCAGCG 965873
Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCC 34014
| ||| |||| |||| ||||||||||| || |||||||||||||| |||
Sbjct 965874 AGCGTGCGCCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCC 965927
Score = 102 bits (112), Expect = 6e-17
Identities = 91/114 (80%), Gaps = 0/114 (0%)
Strand=Plus/Plus
Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960
|| || | ||| ||||||||||| || || |||||||||||||| |||||||| || ||
Sbjct 966247 CCACCGCGCAGGCGCAGCACCAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCAGCG 966306
Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCC 34014
| ||| |||| |||| ||||||||||| || |||||||||||||| |||
Sbjct 966307 AGCGTGCGCCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCC 966360
Score = 102 bits (112), Expect = 6e-17
Identities = 91/114 (80%), Gaps = 0/114 (0%)
Strand=Plus/Plus
Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960
|| || | ||| ||||||||||| || || |||||||||||||| |||||||| || ||
Sbjct 968234 CCACCGCGCAGGCGCAGCACCAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCAGCG 968293
Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCC 34014
| ||| |||| |||| ||||||||||| || |||||||||||||| |||
Sbjct 968294 AGCGTGCGCCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCC 968347
>seq19
Length=1619492
Score = 98.7 bits (108), Expect = 8e-16
Identities = 90/114 (79%), Gaps = 0/114 (0%)
Strand=Plus/Minus
Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959
||| |||| ||| ||||||||||| || || |||||||||||||| |||||||| || ||
Sbjct 1128766 ACCGCCTCGCAGGCGCAGCACCAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGC 1128707
Query 33960 CAATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATC 34013
| ||| |||| |||| |||||||| || || || ||||||||||| ||
Sbjct 1128706 GAGCGTGCGCCCGTCCTCCAGCTGCTTGCCCGCGAAGATGAGGCGCTGCTGGTC 1128653
Score = 89.7 bits (98), Expect = 4e-13
Identities = 84/107 (79%), Gaps = 0/107 (0%)
Strand=Plus/Minus
Query 33907 CTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGT 33966
|| || ||||||||||| || || |||||||||||||| |||||||| || || |
Sbjct 1129599 CTGAGGCGCAGCACCAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGCGAGCGTG 1129540
Query 33967 CGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATC 34013
||| |||| |||| |||||||| || || || ||||||||||| ||
Sbjct 1129539 CGCCCGTCCTCCAGCTGCTTGCCCGCGAAGATGAGGCGCTGCTGGTC 1129493
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397050916583146
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |