Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gonium_20pectorale_20[genbank_20GCA_5F001584585.1_202016-03-09] 2,373 sequences; 148,806,073 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq20 116 4e-21 >seq20 Length=1589639 Score = 116 bits (128), Expect = 4e-21 Identities = 124/164 (76%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 95077 CACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATC 95136 ||||||||| || ||||| ||||| ||||||||||| ||||| ||| |||||||| Sbjct 869445 CACGGTGTGCGCAATAGCCTGCTGGTGGCGCCCATGCCCACCGCCTCGACGTCGCAGATC 869504 Query 95137 CTTGGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTC 95196 || ||||||||||||| || || |||| |||||||||| | ||| | || ||||| Sbjct 869505 CTGGGCAACAACGAGTGCTTTGAGCCCTACACCTCCAACATCTACGTGCGCCGCGTGCTG 869564 Query 95197 GCCGGGGAATTCCCCGTCATCAACAAGCACCTCCTACGGGACCT 95240 | || || ||| | ||| | ||| ||||||| || | ||||| Sbjct 869565 TCTGGCGAGTTCACGGTCGTGAACCAGCACCTGCTGCACGACCT 869608 Score = 109 bits (120), Expect = 5e-19 Identities = 123/165 (75%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 94144 TACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCCTGG 94203 |||||||||||||| ||||| | | | ||||| | || || |||| | ||||||||| Sbjct 867310 TACGTGGACCAGGGCGGTGGCAAGCGCAAGGGCGCGTTTGCCATCTACATGGAGCCCTGG 867369 Query 94204 CACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGGAGAGG 94263 ||||| |||||| | ||| | |||||||| |||||||||||||| || || | | Sbjct 867370 CACGCTGACGTGTTCGACTTCCTGGACCTGCGCAAGAACCACGGCAAGGAGGAGGCGCGC 867429 Query 94264 GCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATG 94308 ||| | ||||||||||| | || ||| | || |||| || ||| Sbjct 867430 GCCCGCGACCTCTTCTATGGCCTTTGGATCCCCAACCTCTTCATG 867474 Score = 93.3 bits (102), Expect = 4e-14 Identities = 124/171 (73%), Gaps = 1/171 (1%) Strand=Plus/Plus Query 93998 AGGACTGTGCGACCATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTAC 94057 |||| || || |||||| || ||| || || |||||| | ||||| | | | Sbjct 866931 AGGAGTGCGCCGTCATCTCGAAGAGCGCTGGCGGCATCGGGCTGTCGATCCACTGCATCC 866990 Query 94058 GTGCCAGGGGTTCCTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGC 94117 | |||| || || ||||||||||||||||| |||||||| |||||| |||| || |||| Sbjct 866991 GCGCCACCGGCTCGTACATCCGCGGTACCAACGGCACCTCGAACGGCATCGTGCCCATGC 867050 Query 94118 TCCGGGTCTTCAACAACGCGGCGCGCTACG-TGGACCAGGGTGGTGGGAGG 94167 | || || |||||| || | ||||| || | || | |||| | |||||| Sbjct 867051 TGCGCGTGTTCAACGACACCGCGCGGTAAGAGGGGCGAGGGGTGGGGGAGG 867101 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494708525273080