Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gonium_20pectorale_20[genbank_20GCA_5F001584585.1_202016-03-09] 2,373 sequences; 148,806,073 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq20 118 1e-21 >seq20 Length=1589639 Score = 118 bits (130), Expect = 1e-21 Identities = 129/169 (76%), Gaps = 2/169 (1%) Strand=Plus/Minus Query 52614 GAGGCGGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGC 52673 |||||||| || ||||| ||||||||| |||| |||||||||||| || ||| | ||| Sbjct 1013122 GAGGCGGTCGCCATCGAGCAGGAGTTTTGCACGGACGCGCTGCCGGTGGACCTGATCGGC 1013063 Query 52674 ATGAACGCGCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAG 52733 |||||||||| ||| || ||||||| ||||||||||||| || ||| | ||| | Sbjct 1013062 ATGAACGCGCGCCTGATGGGCCAGTACATTCAGTTTGTGGCGGACCGGCTGCTCGTGGCG 1013003 Query 52734 CTCGGGCAGCCA-AAGTACTTCAACGCTCGCAATCCGTTTGAGTTTATG 52781 || ||| | ||| ||| ||| ||||| ||| || ||||| || ||| Sbjct 1013002 CT-GGGTAACCAGAAGCACTACAACGTGGCCAACCCCTTTGACTTCATG 1012955 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496247679616560