Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gonium_20pectorale_20[genbank_20GCA_5F001584585.1_202016-03-09] 2,373 sequences; 148,806,073 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq20 125 1e-23 >seq20 Length=1589639 Score = 125 bits (138), Expect = 1e-23 Identities = 132/171 (77%), Gaps = 2/171 (1%) Strand=Plus/Plus Query 159914 AACAGGAGGCACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGAC 159973 || || ||||| ||||||||| |||||| |||||||| || ||||| ||||||||| Sbjct 1013366 AAGAGCAGGCAGGCAAAGTCGGTGTGCAGCCCCTCGTCGCGGCTGATGAGCTCGTTGGAG 1013425 Query 159974 ATGATGAGGCCCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCA-CC 160032 | | ||||||| ||||||| || ||| |||||||| || || | ||| || | || Sbjct 1013426 AAGGTGAGGCCGGGCATGAGACCGCGCTTCTTGAGCCAGAAGATCGA-GCAGAACGAGCC 1013484 Query 160033 GCTAAAAAAGATCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAA 160083 ||| || ||||| |||||||| ||||||||||| || |||| ||| || || Sbjct 1013485 GCTGAAGAAGATGCCCTCCACAGCCGCAAACGCAACTAGCCGCTCCCCGAA 1013535 Score = 107 bits (118), Expect = 3e-18 Identities = 135/183 (74%), Gaps = 2/183 (1%) Strand=Plus/Minus Query 203884 CAGATAGTACATGCCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAG 203943 ||| ||||||||||||||||| |||||||| |||| |||| | ||||| || | || Sbjct 870071 CAGGTAGTACATGCCGGTCTTGAGGCCCTTGCGCCAGGCGTAGAAGTGCAGCGACGTGAG 870012 Query 203944 TTTGCTCACGTTGGGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGG 204003 |||| | ||||||||||| |||| | ||| | ||||| ||||||||| | || Sbjct 870011 CTTGCCGAAGTTGGGGTCGGGCATGAAGACGTTGAACGACTGCGACTGGTCGATGTA-GG 869953 Query 204004 CGCC-CGATCTGCGGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGA 204062 |||| || || |||||||| | | | || |||| |||||||||||||||||| Sbjct 869952 CGCCGCGGTCGGCGGCCATGTCCACCAGCGTGCGCTGCTTGATCTCCCACACCGTCTTGT 869893 Query 204063 ACA 204065 ||| Sbjct 869892 ACA 869890 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795131613708880