Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gonium_20pectorale_20[genbank_20GCA_5F001584585.1_202016-03-09]
2,373 sequences; 148,806,073 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq20 125 1e-23
>seq20
Length=1589639
Score = 125 bits (138), Expect = 1e-23
Identities = 132/171 (77%), Gaps = 2/171 (1%)
Strand=Plus/Plus
Query 159914 AACAGGAGGCACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGAC 159973
|| || ||||| ||||||||| |||||| |||||||| || ||||| |||||||||
Sbjct 1013366 AAGAGCAGGCAGGCAAAGTCGGTGTGCAGCCCCTCGTCGCGGCTGATGAGCTCGTTGGAG 1013425
Query 159974 ATGATGAGGCCCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCA-CC 160032
| | ||||||| ||||||| || ||| |||||||| || || | ||| || | ||
Sbjct 1013426 AAGGTGAGGCCGGGCATGAGACCGCGCTTCTTGAGCCAGAAGATCGA-GCAGAACGAGCC 1013484
Query 160033 GCTAAAAAAGATCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAA 160083
||| || ||||| |||||||| ||||||||||| || |||| ||| || ||
Sbjct 1013485 GCTGAAGAAGATGCCCTCCACAGCCGCAAACGCAACTAGCCGCTCCCCGAA 1013535
Score = 107 bits (118), Expect = 3e-18
Identities = 135/183 (74%), Gaps = 2/183 (1%)
Strand=Plus/Minus
Query 203884 CAGATAGTACATGCCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAG 203943
||| ||||||||||||||||| |||||||| |||| |||| | ||||| || | ||
Sbjct 870071 CAGGTAGTACATGCCGGTCTTGAGGCCCTTGCGCCAGGCGTAGAAGTGCAGCGACGTGAG 870012
Query 203944 TTTGCTCACGTTGGGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGG 204003
|||| | ||||||||||| |||| | ||| | ||||| ||||||||| | ||
Sbjct 870011 CTTGCCGAAGTTGGGGTCGGGCATGAAGACGTTGAACGACTGCGACTGGTCGATGTA-GG 869953
Query 204004 CGCC-CGATCTGCGGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGA 204062
|||| || || |||||||| | | | || |||| ||||||||||||||||||
Sbjct 869952 CGCCGCGGTCGGCGGCCATGTCCACCAGCGTGCGCTGCTTGATCTCCCACACCGTCTTGT 869893
Query 204063 ACA 204065
|||
Sbjct 869892 ACA 869890
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795131613708880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |