Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gonium_20pectorale_20[genbank_20GCA_5F001584585.1_202016-03-09] 2,373 sequences; 148,806,073 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq20 111 2e-19 seq19 105 8e-18 >seq20 Length=1589639 Score = 111 bits (122), Expect = 2e-19 Identities = 85/101 (84%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438 |||| |||||| |||| || |||||||| ||||| |||||||| | || |||||| || Sbjct 962746 CGCAGCACCAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCAGCGAGCGTGCGCCCG 962805 Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTC 46479 || || ||||||||||||||||| |||| |||||||||||| Sbjct 962806 TCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTC 962846 Score = 111 bits (122), Expect = 2e-19 Identities = 85/101 (84%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438 |||| |||||| |||| || |||||||| ||||| |||||||| | || |||||| || Sbjct 965393 CGCAGCACCAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCAGCGAGCGTGCGCCCG 965452 Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTC 46479 || || ||||||||||||||||| |||| |||||||||||| Sbjct 965453 TCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTC 965493 Score = 111 bits (122), Expect = 2e-19 Identities = 85/101 (84%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438 |||| |||||| |||| || |||||||| ||||| |||||||| | || |||||| || Sbjct 965826 CGCAGCACCAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCAGCGAGCGTGCGCCCG 965885 Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTC 46479 || || ||||||||||||||||| |||| |||||||||||| Sbjct 965886 TCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTC 965926 Score = 111 bits (122), Expect = 2e-19 Identities = 85/101 (84%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438 |||| |||||| |||| || |||||||| ||||| |||||||| | || |||||| || Sbjct 966259 CGCAGCACCAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCAGCGAGCGTGCGCCCG 966318 Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTC 46479 || || ||||||||||||||||| |||| |||||||||||| Sbjct 966319 TCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTC 966359 Score = 111 bits (122), Expect = 2e-19 Identities = 85/101 (84%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438 |||| |||||| |||| || |||||||| ||||| |||||||| | || |||||| || Sbjct 968246 CGCAGCACCAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCAGCGAGCGTGCGCCCG 968305 Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTC 46479 || || ||||||||||||||||| |||| |||||||||||| Sbjct 968306 TCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTC 968346 >seq19 Length=1619492 Score = 105 bits (116), Expect = 8e-18 Identities = 85/103 (83%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438 |||| |||||| || | || |||||||| ||||| |||||||||| || |||||| || Sbjct 1128753 CGCAGCACCAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGCCCG 1128694 Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGG 46481 || || ||||||||||| ||||| || | |||||||||||||| Sbjct 1128693 TCCTCCAGCTGCTTGCCCGCGAAGATGAGGCGCTGCTGGTCGG 1128651 Score = 105 bits (116), Expect = 8e-18 Identities = 85/103 (83%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438 |||| |||||| || | || |||||||| ||||| |||||||||| || |||||| || Sbjct 1129593 CGCAGCACCAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGCCCG 1129534 Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGG 46481 || || ||||||||||| ||||| || | |||||||||||||| Sbjct 1129533 TCCTCCAGCTGCTTGCCCGCGAAGATGAGGCGCTGCTGGTCGG 1129491 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565221633615960