Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gonium_20pectorale_20[genbank_20GCA_5F001584585.1_202016-03-09] 2,373 sequences; 148,806,073 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq20 118 1e-21 seq29 82.4 9e-11 >seq20 Length=1589639 Score = 118 bits (130), Expect = 1e-21 Identities = 122/160 (76%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 102172 CCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCT 102231 |||| | ||||| || | || |||||| ||| ||||| ||||||||| || || | Sbjct 1013537 CCTTCGGGGAGCGGCTAGTTGCGTTTGCGGCTGTGGAGGGCATCTTCTTCAGCGGCTCGT 1013478 Query 102232 TCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACG 102291 ||||| | || | |||||||||||||| ||||||||||| || ||| ||||||||||| Sbjct 1013477 TCTGCTCGATCTTCTGGCTCAAGAAGCGCGGTCTCATGCCCGGCCTCACCTTCTCCAACG 1013418 Query 102292 AGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331 |||| ||| || |||||||| || ||| || ||||| Sbjct 1013417 AGCTCATCAGCCGCGACGAGGGGCTGCACACCGACTTTGC 1013378 >seq29 Length=1309802 Score = 82.4 bits (90), Expect = 9e-11 Identities = 151/216 (70%), Gaps = 8/216 (4%) Strand=Plus/Minus Query 15885 CGATCAAAGCGACCTGGGCGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTTGCG 15944 || || ||||| || ||||| || |||||| || ||||| || |||| || || ||| Sbjct 708687 CGGTCGAAGCGGCCGGGGCGCAGCAGCGCGGGGTCCAGGATGTCGGCGCGGTTGGTGGCG 708628 Query 15945 GCGATGACAACAATACCTGTTTCGTTATCAAAACCATCCATCTCTGTCAAAAGCTGGTTA 16004 |||||||| | || || || | | || || || |||||||| |||| | |||||| Sbjct 708627 GCGATGACGATGATGCCCGTGTTGCCCTCGAAGCCGTCCATCTCAGTCAGCATCTGGTTG 708568 Query 16005 ATAGTTTGTTCCCGTTCATCATTCGCTGGCATACCA---CCAGCACTGC-GTTGCTTTCC 16060 | || || || || || || || | || | |||| || | | || | ||| || Sbjct 708567 AGCGTCTGCTCGCGCTCGTCGTT-GGTGCC--ACCAATGCCCGTGCCGCGGCTGC-GGCC 708512 Query 16061 CACGGCATCAATCTCATCAATGAAGACGATGCATGG 16096 |||||||||||||||||| | ||| || | ||| || Sbjct 708511 CACGGCATCAATCTCATCCACGAACACCAGGCAGGG 708476 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620723987228560