Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gonium_20pectorale_20[genbank_20GCA_5F001584585.1_202016-03-09]
2,373 sequences; 148,806,073 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq20 118 1e-21
seq29 82.4 9e-11
>seq20
Length=1589639
Score = 118 bits (130), Expect = 1e-21
Identities = 122/160 (76%), Gaps = 0/160 (0%)
Strand=Plus/Minus
Query 102172 CCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCT 102231
|||| | ||||| || | || |||||| ||| ||||| ||||||||| || || |
Sbjct 1013537 CCTTCGGGGAGCGGCTAGTTGCGTTTGCGGCTGTGGAGGGCATCTTCTTCAGCGGCTCGT 1013478
Query 102232 TCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACG 102291
||||| | || | |||||||||||||| ||||||||||| || ||| |||||||||||
Sbjct 1013477 TCTGCTCGATCTTCTGGCTCAAGAAGCGCGGTCTCATGCCCGGCCTCACCTTCTCCAACG 1013418
Query 102292 AGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331
|||| ||| || |||||||| || ||| || |||||
Sbjct 1013417 AGCTCATCAGCCGCGACGAGGGGCTGCACACCGACTTTGC 1013378
>seq29
Length=1309802
Score = 82.4 bits (90), Expect = 9e-11
Identities = 151/216 (70%), Gaps = 8/216 (4%)
Strand=Plus/Minus
Query 15885 CGATCAAAGCGACCTGGGCGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTTGCG 15944
|| || ||||| || ||||| || |||||| || ||||| || |||| || || |||
Sbjct 708687 CGGTCGAAGCGGCCGGGGCGCAGCAGCGCGGGGTCCAGGATGTCGGCGCGGTTGGTGGCG 708628
Query 15945 GCGATGACAACAATACCTGTTTCGTTATCAAAACCATCCATCTCTGTCAAAAGCTGGTTA 16004
|||||||| | || || || | | || || || |||||||| |||| | ||||||
Sbjct 708627 GCGATGACGATGATGCCCGTGTTGCCCTCGAAGCCGTCCATCTCAGTCAGCATCTGGTTG 708568
Query 16005 ATAGTTTGTTCCCGTTCATCATTCGCTGGCATACCA---CCAGCACTGC-GTTGCTTTCC 16060
| || || || || || || || | || | |||| || | | || | ||| ||
Sbjct 708567 AGCGTCTGCTCGCGCTCGTCGTT-GGTGCC--ACCAATGCCCGTGCCGCGGCTGC-GGCC 708512
Query 16061 CACGGCATCAATCTCATCAATGAAGACGATGCATGG 16096
|||||||||||||||||| | ||| || | ||| ||
Sbjct 708511 CACGGCATCAATCTCATCCACGAACACCAGGCAGGG 708476
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620723987228560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |