Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gonium_20pectorale_20[genbank_20GCA_5F001584585.1_202016-03-09] 2,373 sequences; 148,806,073 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq3 93.3 5e-14 seq20 84.2 3e-11 >seq3 Length=4638507 Score = 93.3 bits (102), Expect = 5e-14 Identities = 150/214 (70%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 11503 CGATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTTGTAGCG 11562 || ||||| || || ||||| || ||||| | || || | ||| ||||| || ||| Sbjct 4610982 CGGTCGAAGCGGCCGGGGCGCAGCAGAGCCTGGTCCAGCACGTCGGGGCGGTTGGTGGCG 4610923 Query 11563 GCAATGACTACAATGCCAGTCTCATTGTCGAAACCGTCCATTTCTGTGAGAAGCTGGTTG 11622 || | || | | ||| || | || || |||||||| || || || ||||||||| Sbjct 4610922 GCCAGCACGATGACGCCCGTGTTGCCCTCAAAGCCGTCCATCTCGGTCAGCAGCTGGTTG 4610863 Query 11623 ATCGTCTGTTCACGCTCATCGTTGGAGGGCATACCA--CCTGCCGAACGCTTCTTACCGA 11680 || ||||| || |||||||||||| || ||| || || ||||| || | Sbjct 4610862 ATGGTCTGCTCGCGCTCATCGTTG--CCGCCGCCCATGCCGGCGCCACGCTGGCGGCCCA 4610805 Query 11681 CAGCGTCAATCTCATCGATGAATACGATACACGG 11714 |||||||||||||||||||||| | ||| || || Sbjct 4610804 CAGCGTCAATCTCATCGATGAAGATGATGCAGGG 4610771 >seq20 Length=1589639 Score = 84.2 bits (92), Expect = 3e-11 Identities = 117/164 (71%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 109690 TTGAGATCGTCAACAAGATGCTTGTTGACCACGACAAATTCACCAGCAAGTGTGCGTCGG 109749 ||||| |||| | || |||| ||| || || || || |||| || ||| || Sbjct 869611 TTGAGGTCGTGCAGCAGGTGCTGGTTCACGACCGTGAACTCGCCAGACAGCACGCGGCGC 869552 Query 109750 AGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTG 109809 | ||||||||| | |||||||| || || ||||| |||||||| ||||| || | || Sbjct 869551 ACGTAGATGTTGGAGGTGTAGGGCTCAAAGCACTCGTTGTTGCCCAGGATCTGCGACGTC 869492 Query 109810 GAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACC 109853 || || ||||||||||| |||| || || || || || | ||| Sbjct 869491 GAGGCGGTGGGCATGGGCGCCACCAGCAGGCTATTGCGCACACC 869448 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588958529499400