Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gonium_20pectorale_20[genbank_20GCA_5F001584585.1_202016-03-09] 2,373 sequences; 148,806,073 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq144 84.2 2e-11 >seq144 Length=117093 Score = 84.2 bits (92), Expect = 2e-11 Identities = 110/146 (75%), Gaps = 6/146 (4%) Strand=Plus/Minus Query 52051 AGATGGGCGACAAGTTTGCGTCGTTC-ACGGCGCAAAAGGGGACGTGCGG-AGC-CGTCC 52107 || ||||||||||||| || ||| | ||||| || ||||| |||||||| | | ||| | Sbjct 86049 AGGTGGGCGACAAGTTCGCCTCGCGCCACGGC-CAGAAGGGCACGTGCGGCATCACGTAC 85991 Query 52108 TGACCCAGGAGGACATGCCCTTCGACAAGGACGGGGTGGTGCCCGACCTCATCATCAACC 52167 || |||||||||||||||| ||| || | ||||| ||| ||||| |||||| Sbjct 85990 --ACGATGGAGGACATGCCCTTCACGGCGGAGGGCATCGTGCCGGACATCATCGTCAACC 85933 Query 52168 CCCACGCCTTTCCATCCAGGATGACC 52193 | |||||| | || ||| | |||||| Sbjct 85932 CGCACGCCATCCCGTCCCGCATGACC 85907 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408605782395929