Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gonium_20pectorale_20[genbank_20GCA_5F001584585.1_202016-03-09] 2,373 sequences; 148,806,073 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq20 143 5e-29 >seq20 Length=1589639 Score = 143 bits (158), Expect = 5e-29 Identities = 133/169 (79%), Gaps = 0/169 (0%) Strand=Plus/Plus Query 48123 AGAGCATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGA 48182 |||||| |||||||||||| |||||| || ||||| |||||||||||| ||||||||| Sbjct 1013367 AGAGCAGGCAGGCAAAGTCGGTGTGCAGCCCCTCGTCGCGGCTGATGAGCTCGTTGGAGA 1013426 Query 48183 AGCAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAG 48242 || ||| || ||||||| || | || ||||||||||| || | ||| ||||| Sbjct 1013427 AGGTGAGGCCGGGCATGAGACCGCGCTTCTTGAGCCAGAAGATCGAGCAGAACGAGCCGC 1013486 Query 48243 AGAAGAAGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAA 48291 |||||||||||||||||| ||||| ||||| |||| ||| ||||| Sbjct 1013487 TGAAGAAGATGCCCTCCACAGCCGCAAACGCAACTAGCCGCTCCCCGAA 1013535 Score = 113 bits (124), Expect = 8e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 212867 GTTCCAGAGGCCCCTGGTCTCCAGGCACTTGACCAGGTGAGGGTTGACTATCTGGAAGTC 212926 ||||||||||||| || | ||| | | |||||| |||| || | | ||| || Sbjct 869630 GTTCCAGAGGCCCATGCGGTTGAGGTCGTGCAGCAGGTGCTGGTTCACGACCGTGAACTC 869571 Query 212927 ACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCTCTCGTTGTT 212986 || || ||||| | | | ||| | ||| || ||||||||||| | || ||||||||| Sbjct 869570 GCCAGACAGCACGCGGCGCACGTAGATGTTGGAGGTGTAGGGCTCAAAGCACTCGTTGTT 869511 Query 212987 CCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGACTGTTCCTCAC 213046 ||||| ||||| | || ||| ||||||||||| |||||||| || || || | ||| Sbjct 869510 GCCCAGGATCTGCGACGTCGAGGCGGTGGGCATGGGCGCCACCAGCAGGCTATTGCGCAC 869451 Query 213047 TCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTCCCATCTGCCAG 213096 ||||||| ||||| || || || | | |||||| || |||| || Sbjct 869450 ACCGTGCTGTGCGATGCGGTCACGCAGGGCGGGCCAGTCGCAGCTGCGAG 869401 Score = 105 bits (116), Expect = 1e-17 Identities = 131/178 (74%), Gaps = 6/178 (3%) Strand=Plus/Minus Query 213805 CATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGG 213864 ||||||| || || |||||| |||| |||| ||| || | ||| ||||| | || Sbjct 867487 CATCTCTTAC---CTCCATGAAGAGGTTGGGGATCCAAAGGCCATAGAAGAGGTCGCGGG 867431 Query 213865 TCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGT 213924 | | ||| ||| || ||| |||||||| || || ||||| || | ||| |||| Sbjct 867430 CGCGCGCCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCCAGGAAGTCGAACACGTCAGCGT 867371 Query 213925 GCCACGGCTCCATGTAGATGGCAAAGGCGCCCGGCCTCTTG---CCGCCCTGGTCCAC 213979 |||| |||||||||||||||||||| |||||| | |||| |||||||||||||| Sbjct 867370 GCCAGGGCTCCATGTAGATGGCAAACGCGCCCTTGCGCTTGCCACCGCCCTGGTCCAC 867313 Score = 105 bits (116), Expect = 1e-17 Identities = 97/120 (81%), Gaps = 2/120 (2%) Strand=Plus/Minus Query 213528 GTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGG 213587 |||||||| |||||||| |||||||||||| ||| ||||||||||||||||| ||| Sbjct 868107 GTGTACTCGATGATCTCTGTGCACAGGTTGGAGCACTTGATGGTGCCCAGGTTCTTCTGG 868048 Query 213588 TTTGACTTTGCGTTGGCAGAA-TCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTG 213646 || ||||| ||||| ||| |||||||| |||||||||||| ||||| || | ||| Sbjct 868047 TTCGACTTCTCGTTG-CAGTGGTCCTTGTACAGCATGTAGGGGTTGCCGGTTTCCACCTG 867989 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931505168408320