Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gonium_20pectorale_20[genbank_20GCA_5F001584585.1_202016-03-09] 2,373 sequences; 148,806,073 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq20 163 5e-35 >seq20 Length=1589639 Score = 163 bits (180), Expect = 5e-35 Identities = 145/179 (81%), Gaps = 2/179 (1%) Strand=Plus/Minus Query 25864 GCTACGTTTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGT 25923 || || || || |||||||| || || ||||| ||||||||||||||||| |||||||| Sbjct 1013541 GCGACCTTCGGGGAGCGGCTAGTTGCGTTTGCGGCTGTGGAGGGCATCTTCTTCAGCGGC 1013482 Query 25924 TCGTT-TGCGGCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTC 25982 ||||| ||| | ||||||||||||||| || || ||||||||| || ||| || Sbjct 1013481 TCGTTCTGCT-CGATCTTCTGGCTCAAGAAGCGCGGTCTCATGCCCGGCCTCACCTTCTC 1013423 Query 25983 CAACGAGCTCATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACA 26041 |||||||||||||||| | |||||||| || |||| || |||||||||||||||| || Sbjct 1013422 CAACGAGCTCATCAGCCGCGACGAGGGGCTGCACACCGACTTTGCCTGCCTGCTCTTCA 1013364 Score = 111 bits (122), Expect = 3e-19 Identities = 112/146 (77%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 221107 CATGTGCTTGTTCACCACTTGGAAATCTCCCGAGAGCACCCTCCTCTGGTACAGGTTAGA 221166 || ||||| |||||| || ||| || || || ||||| | | | ||| | ||| || Sbjct 869597 CAGGTGCTGGTTCACGACCGTGAACTCGCCAGACAGCACGCGGCGCACGTAGATGTTGGA 869538 Query 221167 AGTGAACGGTTCGATGCTCTCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGGTGGGCAT 221226 ||| | || || | || ||||||||||||||||||||| | ||| |||||||||||| Sbjct 869537 GGTGTAGGGCTCAAAGCACTCGTTGTTGCCCAGGATCTGCGACGTCGAGGCGGTGGGCAT 869478 Query 221227 GGGTGCCACCAGCAGACTGTTGCGCA 221252 ||| ||||||||||| || ||||||| Sbjct 869477 GGGCGCCACCAGCAGGCTATTGCGCA 869452 Score = 95.1 bits (104), Expect = 2e-14 Identities = 120/165 (73%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 222037 CTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTC 222096 || ||||||||||| |||||||| || | | ||||| || | || ||| |||||| Sbjct 867477 CTCCATGAAGAGGTTGGGGATCCAAAGGCCATAGAAGAGGTCGCGGGCGCGCGCCTCCTC 867418 Query 222097 CACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAG 222156 | ||||| ||| || | ||| |||| || || || | |||||||||||| ||||||| Sbjct 867417 CTTGCCGTGGTTCTTGCGCAGGTCCAGGAAGTCGAACACGTCAGCGTGCCAGGGCTCCAT 867358 Query 222157 ATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCTGATCCAC 222201 |||| ||| | ||||| |||||| || ||||| ||||| Sbjct 867357 GTAGATGGCAAACGCGCCCTTGCGCTTGCCACCGCCCTGGTCCAC 867313 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928817248141120