Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gonium_20pectorale_20[genbank_20GCA_5F001584585.1_202016-03-09]
2,373 sequences; 148,806,073 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq20 163 5e-35
>seq20
Length=1589639
Score = 163 bits (180), Expect = 5e-35
Identities = 145/179 (81%), Gaps = 2/179 (1%)
Strand=Plus/Minus
Query 25864 GCTACGTTTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGT 25923
|| || || || |||||||| || || ||||| ||||||||||||||||| ||||||||
Sbjct 1013541 GCGACCTTCGGGGAGCGGCTAGTTGCGTTTGCGGCTGTGGAGGGCATCTTCTTCAGCGGC 1013482
Query 25924 TCGTT-TGCGGCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTC 25982
||||| ||| | ||||||||||||||| || || ||||||||| || ||| ||
Sbjct 1013481 TCGTTCTGCT-CGATCTTCTGGCTCAAGAAGCGCGGTCTCATGCCCGGCCTCACCTTCTC 1013423
Query 25983 CAACGAGCTCATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACA 26041
|||||||||||||||| | |||||||| || |||| || |||||||||||||||| ||
Sbjct 1013422 CAACGAGCTCATCAGCCGCGACGAGGGGCTGCACACCGACTTTGCCTGCCTGCTCTTCA 1013364
Score = 111 bits (122), Expect = 3e-19
Identities = 112/146 (77%), Gaps = 0/146 (0%)
Strand=Plus/Minus
Query 221107 CATGTGCTTGTTCACCACTTGGAAATCTCCCGAGAGCACCCTCCTCTGGTACAGGTTAGA 221166
|| ||||| |||||| || ||| || || || ||||| | | | ||| | ||| ||
Sbjct 869597 CAGGTGCTGGTTCACGACCGTGAACTCGCCAGACAGCACGCGGCGCACGTAGATGTTGGA 869538
Query 221167 AGTGAACGGTTCGATGCTCTCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGGTGGGCAT 221226
||| | || || | || ||||||||||||||||||||| | ||| ||||||||||||
Sbjct 869537 GGTGTAGGGCTCAAAGCACTCGTTGTTGCCCAGGATCTGCGACGTCGAGGCGGTGGGCAT 869478
Query 221227 GGGTGCCACCAGCAGACTGTTGCGCA 221252
||| ||||||||||| || |||||||
Sbjct 869477 GGGCGCCACCAGCAGGCTATTGCGCA 869452
Score = 95.1 bits (104), Expect = 2e-14
Identities = 120/165 (73%), Gaps = 0/165 (0%)
Strand=Plus/Minus
Query 222037 CTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTC 222096
|| ||||||||||| |||||||| || | | ||||| || | || ||| ||||||
Sbjct 867477 CTCCATGAAGAGGTTGGGGATCCAAAGGCCATAGAAGAGGTCGCGGGCGCGCGCCTCCTC 867418
Query 222097 CACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAG 222156
| ||||| ||| || | ||| |||| || || || | |||||||||||| |||||||
Sbjct 867417 CTTGCCGTGGTTCTTGCGCAGGTCCAGGAAGTCGAACACGTCAGCGTGCCAGGGCTCCAT 867358
Query 222157 ATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCTGATCCAC 222201
|||| ||| | ||||| |||||| || ||||| |||||
Sbjct 867357 GTAGATGGCAAACGCGCCCTTGCGCTTGCCACCGCCCTGGTCCAC 867313
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928817248141120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |