Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gonium_20pectorale_20[genbank_20GCA_5F001584585.1_202016-03-09]
2,373 sequences; 148,806,073 total letters
Query= NC_020864.1
Length=205622
Score E
Sequences producing significant alignments: (Bits) Value
seq47 98.7 1e-15
seq20 93.3 6e-14
seq121 91.5 2e-13
>seq47
Length=1007904
Score = 98.7 bits (108), Expect = 1e-15
Identities = 84/104 (81%), Gaps = 0/104 (0%)
Strand=Plus/Minus
Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921
||||||||||| || || ||||| || || || || |||||||||||||| ||||| ||
Sbjct 1003215 ATGCAAATCTTCGTTAAGACCCTCACGGGTAAGACCATCACCCTCGAGGTGGAGTCTTCG 1003156
Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGG 171965
||||| ||||| || | || ||||||||||| || ||||| ||
Sbjct 1003155 GACACCATCGAGAATGTGAAGGCCAAGATTCAGGACAAGGAGGG 1003112
>seq20
Length=1589639
Score = 93.3 bits (102), Expect = 6e-14
Identities = 83/104 (80%), Gaps = 0/104 (0%)
Strand=Plus/Minus
Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921
||||| ||||||||||| || || || || || || |||||||| ||||| ||||| ||
Sbjct 965379 ATGCAGATCTTTGTGAAGACGCTGACCGGCAAGACCATCACCCTGGAGGTGGAGTCTTCG 965320
Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGG 171965
||||| ||||| ||| | || |||||||| || || ||||| ||
Sbjct 965319 GACACCATCGAGAACGTGAAGGCCAAGATCCAGGACAAGGAGGG 965276
Score = 93.3 bits (102), Expect = 6e-14
Identities = 83/104 (80%), Gaps = 0/104 (0%)
Strand=Plus/Minus
Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921
||||| ||||||||||| || || || || || || |||||||| ||||| ||||| ||
Sbjct 965812 ATGCAGATCTTTGTGAAGACGCTGACCGGCAAGACCATCACCCTGGAGGTGGAGTCTTCG 965753
Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGG 171965
||||| ||||| ||| | || |||||||| || || ||||| ||
Sbjct 965752 GACACCATCGAGAACGTGAAGGCCAAGATCCAGGACAAGGAGGG 965709
Score = 93.3 bits (102), Expect = 6e-14
Identities = 83/104 (80%), Gaps = 0/104 (0%)
Strand=Plus/Minus
Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921
||||| ||||||||||| || || || || || || |||||||| ||||| ||||| ||
Sbjct 966245 ATGCAGATCTTTGTGAAGACGCTGACCGGCAAGACCATCACCCTGGAGGTGGAGTCTTCG 966186
Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGG 171965
||||| ||||| ||| | || |||||||| || || ||||| ||
Sbjct 966185 GACACCATCGAGAACGTGAAGGCCAAGATCCAGGACAAGGAGGG 966142
Score = 93.3 bits (102), Expect = 6e-14
Identities = 83/104 (80%), Gaps = 0/104 (0%)
Strand=Plus/Minus
Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921
||||| ||||||||||| || || || || || || |||||||| ||||| ||||| ||
Sbjct 968232 ATGCAGATCTTTGTGAAGACGCTGACCGGCAAGACCATCACCCTGGAGGTGGAGTCTTCG 968173
Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGG 171965
||||| ||||| ||| | || |||||||| || || ||||| ||
Sbjct 968172 GACACCATCGAGAACGTGAAGGCCAAGATCCAGGACAAGGAGGG 968129
Score = 89.7 bits (98), Expect = 7e-13
Identities = 84/107 (79%), Gaps = 0/107 (0%)
Strand=Plus/Minus
Query 171859 AGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCG 171918
|| ||||| ||||| || || ||||| || || || || |||||||| ||||| |||||
Sbjct 968757 AGCATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTGGAGGTGGAGTCT 968698
Query 171919 TCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGG 171965
|| ||||| ||||| || | || ||||||||||| || ||||| ||
Sbjct 968697 TCCGACACCATCGAGAATGTTAAGGCCAAGATTCAGGACAAGGAGGG 968651
>seq121
Length=159871
Score = 91.5 bits (100), Expect = 2e-13
Identities = 133/188 (71%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 195662 AAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACT 195721
|||||||||||||| || || | | | |||| || || || || |||| || || |||
Sbjct 63685 AAGATGAAGGAGACGGCCGAGGCGTACCTGGGCAAGACCGTTAAGCATGCTGTGGTTACT 63626
Query 195722 GTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCG 195781
|| || || ||||||| || | || || ||||| || ||||| || | | || |
Sbjct 63625 GTCCCCGCCTACTTCAACGACGCGCAGCGCCAGGCCACCAAGGATGCCGGCACCATCTCC 63566
Query 195782 GGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTG 195841
|| || ||| | | |||||||| || || || || ||||| || || ||||| |||
Sbjct 63565 GGCCTGAACGTGGTCCGCATTATCAACGAGCCCACCGCTGCTGCCATCGCCTATGGCCTG 63506
Query 195842 GACAAGAA 195849
||||||||
Sbjct 63505 GACAAGAA 63498
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 657842886156560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |