Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gonium_20pectorale_20[genbank_20GCA_5F001584585.1_202016-03-09]
2,373 sequences; 148,806,073 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq20 102 5e-17
seq19 93.3 3e-14
>seq20
Length=1589639
Score = 102 bits (112), Expect = 5e-17
Identities = 82/99 (83%), Gaps = 0/99 (0%)
Strand=Plus/Plus
Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824
||| |||||||| | ||||||||||||||| ||||| ||||| | || ||||| | ||
Sbjct 962748 CAGCACCAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCAGCGAGCGTGCGCCCGTC 962807
Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTC 34863
||||| ||||| |||||||||||||| || ||||||||
Sbjct 962808 CTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTC 962846
Score = 102 bits (112), Expect = 5e-17
Identities = 82/99 (83%), Gaps = 0/99 (0%)
Strand=Plus/Plus
Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824
||| |||||||| | ||||||||||||||| ||||| ||||| | || ||||| | ||
Sbjct 965395 CAGCACCAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCAGCGAGCGTGCGCCCGTC 965454
Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTC 34863
||||| ||||| |||||||||||||| || ||||||||
Sbjct 965455 CTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTC 965493
Score = 102 bits (112), Expect = 5e-17
Identities = 82/99 (83%), Gaps = 0/99 (0%)
Strand=Plus/Plus
Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824
||| |||||||| | ||||||||||||||| ||||| ||||| | || ||||| | ||
Sbjct 965828 CAGCACCAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCAGCGAGCGTGCGCCCGTC 965887
Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTC 34863
||||| ||||| |||||||||||||| || ||||||||
Sbjct 965888 CTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTC 965926
Score = 102 bits (112), Expect = 5e-17
Identities = 82/99 (83%), Gaps = 0/99 (0%)
Strand=Plus/Plus
Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824
||| |||||||| | ||||||||||||||| ||||| ||||| | || ||||| | ||
Sbjct 966261 CAGCACCAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCAGCGAGCGTGCGCCCGTC 966320
Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTC 34863
||||| ||||| |||||||||||||| || ||||||||
Sbjct 966321 CTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTC 966359
Score = 102 bits (112), Expect = 5e-17
Identities = 82/99 (83%), Gaps = 0/99 (0%)
Strand=Plus/Plus
Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824
||| |||||||| | ||||||||||||||| ||||| ||||| | || ||||| | ||
Sbjct 968248 CAGCACCAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCAGCGAGCGTGCGCCCGTC 968307
Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTC 34863
||||| ||||| |||||||||||||| || ||||||||
Sbjct 968308 CTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTC 968346
>seq19
Length=1619492
Score = 93.3 bits (102), Expect = 3e-14
Identities = 80/99 (81%), Gaps = 0/99 (0%)
Strand=Plus/Minus
Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824
||| |||||||| | ||||||||||||||| ||||| ||||| | || ||||| | ||
Sbjct 1128751 CAGCACCAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGCCCGTC 1128692
Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTC 34863
||||| ||||| || |||||||| || || ||||||||
Sbjct 1128691 CTCCAGCTGCTTGCCCGCGAAGATGAGGCGCTGCTGGTC 1128653
Score = 93.3 bits (102), Expect = 3e-14
Identities = 80/99 (81%), Gaps = 0/99 (0%)
Strand=Plus/Minus
Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824
||| |||||||| | ||||||||||||||| ||||| ||||| | || ||||| | ||
Sbjct 1129591 CAGCACCAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGCCCGTC 1129532
Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTC 34863
||||| ||||| || |||||||| || || ||||||||
Sbjct 1129531 CTCCAGCTGCTTGCCCGCGAAGATGAGGCGCTGCTGGTC 1129493
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325683380658887
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |