Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gonium_20pectorale_20[genbank_20GCA_5F001584585.1_202016-03-09] 2,373 sequences; 148,806,073 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq20 131 2e-25 seq19 95.1 1e-14 >seq20 Length=1589639 Score = 131 bits (144), Expect = 2e-25 Identities = 160/216 (74%), Gaps = 12/216 (6%) Strand=Plus/Minus Query 147951 GTGCGCAGATAGTACATGCCCGTCTTGAGGCCCATGCGCCATGCGTAGTCGTGCACCGAC 148010 |||||||| ||||||||||| |||||||||||| ||||||| |||||| ||||| |||| Sbjct 870076 GTGCGCAGGTAGTACATGCCGGTCTTGAGGCCCTTGCGCCAGGCGTAGAAGTGCAGCGAC 870017 Query 148011 GACATGAGCGT---GTACGTCGGGTGCGGCACAAACAGATTAAACGACTGGCTCTGGTCA 148067 | ||||| | | | | |||| |||| || | || |||||||| |||||| Sbjct 870016 G---TGAGCTTGCCGAAGTTGGGGTCGGGCATGAAGACGTTGAACGACTGCGACTGGTCG 869960 Query 148068 ATGAACGCGCCACGGTCAGCGGCCATTTCAATGAG---TCGCTTTATCTTCATCTCCCAG 148124 ||| | ||||| ||||| |||||||| || | || |||| ||| |||||||| Sbjct 869959 ATGTAGGCGCCGCGGTCGGCGGCCATGTCCACCAGCGTGCGCT---GCTTGATCTCCCAC 869903 Query 148125 GCCGTCTTGTACAGCCGCTTGATATGATCGGGAATG 148160 |||||||||||||| ||||| | | ||||||| Sbjct 869902 ACCGTCTTGTACAGCGACTTGAGCTCGTGGGGAATG 869867 Score = 109 bits (120), Expect = 5e-19 Identities = 125/168 (74%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 120411 CATAAACTCGAACGGGTTGCTCGCGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGCAG 120470 ||| || || || |||||| | |||| ||| ||| | | |||| | |||||||| Sbjct 1012955 CATGAAGTCAAAGGGGTTGGCCACGTTGTAGTGCTTCTGGTTACCCAGCGCCACGAGCAG 1013014 Query 120471 TCGGTCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCAACGC 120530 |||||||| ||||||| |||||||| || ||| ||||||||||||| | || | Sbjct 1013015 CCGGTCCGCCACAAACTGAATGTACTGGCCCATCAGGCGCGCGTTCATGCCGATCAGGTC 1013074 Query 120531 CACCGGCAACGCCGACGTGAAAAACTCCTTCTCAATGTCCACCGCCTC 120578 |||||||| ||| |||| ||||||||| ||| ||| | |||||||| Sbjct 1013075 CACCGGCAGCGCGTCCGTGCAAAACTCCTGCTCGATGGCGACCGCCTC 1013122 Score = 98.7 bits (108), Expect = 1e-15 Identities = 119/162 (73%), Gaps = 0/162 (0%) Strand=Plus/Minus Query 148239 AGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACGCGCCGCAGA 148298 ||||| | | ||| | ||| ||||| ||| |||||||| | |||||||| |||| Sbjct 869608 AGGTCGTGCAGCAGGTGCTGGTTCACGACCGTGAACTCGCCAGACAGCACGCGGCGCACG 869549 Query 148299 TACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTCGTT 148358 || | |||| || | || ||||| ||||||||||||||| ||||||| |||| Sbjct 869548 TAGATGTTGGAGGTGTAGGGCTCAAAGCACTCGTTGTTGCCCAGGATCTGCGACGTCGAG 869489 Query 148359 GCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCG 148400 || ||||||||| ||| |||||||| ||||||| |||| Sbjct 869488 GCGGTGGGCATGGGCGCCACCAGCAGGCTATTGCGCACACCG 869447 Score = 89.7 bits (98), Expect = 5e-13 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 148864 TGTACTCTACGATCTCGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGAT 148923 ||||||| | |||||| | |||||| ||| ||| ||||| ||||| |||||| || | Sbjct 868106 TGTACTCGATGATCTCTGTGCACAGGTTGGAGCACTTGATGGTGCCCAGGTTCTTCTGGT 868047 Query 148924 TGCTCTTGCTGTTGCACGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGC 148982 | ||| |||||| |||||||||||||||||| || ||| |||||||||||| Sbjct 868046 TCGACTTCTCGTTGCAGTGGTCCTTGTACAGCATGTAGGGGTTGCCGGTTTCCACCTGC 867988 Score = 86.0 bits (94), Expect = 6e-12 Identities = 122/172 (71%), Gaps = 0/172 (0%) Strand=Plus/Plus Query 120639 CAGGCACGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGT 120698 |||||| |||||||| |||||||| ||||||||||| || ||||||||| || || Sbjct 1013371 CAGGCAGGCAAAGTCGGTGTGCAGCCCCTCGTCGCGGCTGATGAGCTCGTTGGAGAAGGT 1013430 Query 120699 CAGGCCGGGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAA 120758 ||||||||||||| || | |||||| |||| || | | || ||| || Sbjct 1013431 GAGGCCGGGCATGAGACCGCGCTTCTTGAGCCAGAAGATCGAGCAGAACGAGCCGCTGAA 1013490 Query 120759 GAACACGCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCC 120810 ||| | ||||||||| ||||| || || | ||||| | || |||||| Sbjct 1013491 GAAGATGCCCTCCACAGCCGCAAACGCAACTAGCCGCTCCCCGAAGGTCGCC 1013542 >seq19 Length=1619492 Score = 95.1 bits (104), Expect = 1e-14 Identities = 79/97 (81%), Gaps = 0/97 (0%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522 |||| ||| ||||| || ||||| ||| | | |||| | |||||| ||||||||||| Sbjct 1128736 GGTGCTCTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGCCCGTCCTCCAGCTGCTTGCC 1128677 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCT 133559 |||| | ||||| |||||||||||||| ||||||||| Sbjct 1128676 CGCGAAGATGAGGCGCTGCTGGTCGGGGGGGATGCCT 1128640 Score = 95.1 bits (104), Expect = 1e-14 Identities = 79/97 (81%), Gaps = 0/97 (0%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522 |||| ||| ||||| || ||||| ||| | | |||| | |||||| ||||||||||| Sbjct 1129576 GGTGCTCTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGCCCGTCCTCCAGCTGCTTGCC 1129517 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCT 133559 |||| | ||||| |||||||||||||| ||||||||| Sbjct 1129516 CGCGAAGATGAGGCGCTGCTGGTCGGGGGGGATGCCT 1129480 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483406460530520