Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gonium_20pectorale_20[genbank_20GCA_5F001584585.1_202016-03-09] 2,373 sequences; 148,806,073 total letters Query= NC_025963.1 Length=139981 Score E Sequences producing significant alignments: (Bits) Value seq239 84.2 2e-11 >seq239 Length=30718 Score = 84.2 bits (92), Expect = 2e-11 Identities = 105/142 (74%), Gaps = 4/142 (3%) Strand=Plus/Plus Query 5378 CCACGAAGGTCTCTTGGCCGAA--GTTGAAGAGCACCACTCCCAGGTTCCCTCGGAAGTC 5435 |||||||| ||| | ||||| |||||| |||| || |||| ||| || ||| |||| Sbjct 19975 CCACGAAGTCCTCGT--CCGAATGGTTGAACAGCAGGACGCCCACGTTGCCGCGGTAGTC 20032 Query 5436 CGGGTCCACGACGCCCGCTCCCACATCCACGAAGTTGTTTACCGCGAGACCGGACCTCGG 5495 | |||||||||||| || || || | |||||| || || || || || || | ||| Sbjct 20033 CTCGTCCACGACGCCAGCGCCAGTGTCGATGAAGTTCTTCACGGCCAGGCCTGAGCGCGG 20092 Query 5496 CGCCACGCGACCGTAGCAGCCG 5517 |||||||| |||||| |||| Sbjct 20093 TGCCACGCGGCCGTAGGTGCCG 20114 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447797916800280