Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gonium_20pectorale_20[genbank_20GCA_5F001584585.1_202016-03-09]
2,373 sequences; 148,806,073 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq20 93.3 4e-14
seq19 82.4 8e-11
>seq20
Length=1589639
Score = 93.3 bits (102), Expect = 4e-14
Identities = 98/129 (76%), Gaps = 0/129 (0%)
Strand=Plus/Plus
Query 8835 CGGTTTGCGCAATTCGCTGTTGGTGGCTTACATGCCCACCGCCACGACTGCTCAAATAAT 8894
|||| |||||||| ||| ||||||| ||||||||||||| |||| | || || |
Sbjct 869447 CGGTGTGCGCAATAGCCTGCTGGTGGCGCCCATGCCCACCGCCTCGACGTCGCAGATCCT 869506
Query 8895 GGGAAACAACGAATCCTTTGAGCCGTTCACCAACAACGTGTACGTGAGACGAGTGTTGGC 8954
||| |||||||| | ||||||||| | |||| |||| | |||||| | || ||| || |
Sbjct 869507 GGGCAACAACGAGTGCTTTGAGCCCTACACCTCCAACATCTACGTGCGCCGCGTGCTGTC 869566
Query 8955 CGGCGATTT 8963
||||| ||
Sbjct 869567 TGGCGAGTT 869575
>seq19
Length=1619492
Score = 82.4 bits (90), Expect = 8e-11
Identities = 90/120 (75%), Gaps = 0/120 (0%)
Strand=Plus/Minus
Query 134493 CTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTG 134552
||||| |||| ||| ||||| || ||| ||||| || |||||||||||| | | |||
Sbjct 1129599 CTGAGGCGCAGCACCAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGCGAGCGTG 1129540
Query 134553 TGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCT 134612
| ||| || ||||| ||||| || || || | |||||||| ||||| || ||||||
Sbjct 1129539 CGCCCGTCCTCCAGCTGCTTGCCCGCGAAGATGAGGCGCTGCTGGTCGGGGGGGATGCCT 1129480
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505383408619960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |