Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gonium_20pectorale_20[genbank_20GCA_5F001584585.1_202016-03-09] 2,373 sequences; 148,806,073 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq20 93.3 4e-14 seq19 82.4 8e-11 >seq20 Length=1589639 Score = 93.3 bits (102), Expect = 4e-14 Identities = 98/129 (76%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 8835 CGGTTTGCGCAATTCGCTGTTGGTGGCTTACATGCCCACCGCCACGACTGCTCAAATAAT 8894 |||| |||||||| ||| ||||||| ||||||||||||| |||| | || || | Sbjct 869447 CGGTGTGCGCAATAGCCTGCTGGTGGCGCCCATGCCCACCGCCTCGACGTCGCAGATCCT 869506 Query 8895 GGGAAACAACGAATCCTTTGAGCCGTTCACCAACAACGTGTACGTGAGACGAGTGTTGGC 8954 ||| |||||||| | ||||||||| | |||| |||| | |||||| | || ||| || | Sbjct 869507 GGGCAACAACGAGTGCTTTGAGCCCTACACCTCCAACATCTACGTGCGCCGCGTGCTGTC 869566 Query 8955 CGGCGATTT 8963 ||||| || Sbjct 869567 TGGCGAGTT 869575 >seq19 Length=1619492 Score = 82.4 bits (90), Expect = 8e-11 Identities = 90/120 (75%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 134493 CTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTG 134552 ||||| |||| ||| ||||| || ||| ||||| || |||||||||||| | | ||| Sbjct 1129599 CTGAGGCGCAGCACCAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGCGAGCGTG 1129540 Query 134553 TGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCT 134612 | ||| || ||||| ||||| || || || | |||||||| ||||| || |||||| Sbjct 1129539 CGCCCGTCCTCCAGCTGCTTGCCCGCGAAGATGAGGCGCTGCTGGTCGGGGGGGATGCCT 1129480 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505383408619960