Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gonium_20pectorale_20[genbank_20GCA_5F001584585.1_202016-03-09]
2,373 sequences; 148,806,073 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq20 89.7 1e-12
seq19 86.0 1e-11
seq47 84.2 5e-11
>seq20
Length=1589639
Score = 89.7 bits (98), Expect = 1e-12
Identities = 82/104 (79%), Gaps = 0/104 (0%)
Strand=Plus/Plus
Query 211011 CCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCG 211070
|| ||||||||||||||||| |||||||| ||||||||||| || || |||||
Sbjct 965276 CCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCCGAAGACTCCACCTCC 965335
Query 211071 AGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| ||||| ||||| || || || ||||| ||||| | ||||||
Sbjct 965336 AGGGTGATGGTCTTGCCGGTCAGCGTCTTCACAAAGATCTGCAT 965379
Score = 89.7 bits (98), Expect = 1e-12
Identities = 82/104 (79%), Gaps = 0/104 (0%)
Strand=Plus/Plus
Query 211011 CCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCG 211070
|| ||||||||||||||||| |||||||| ||||||||||| || || |||||
Sbjct 965709 CCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCCGAAGACTCCACCTCC 965768
Query 211071 AGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| ||||| ||||| || || || ||||| ||||| | ||||||
Sbjct 965769 AGGGTGATGGTCTTGCCGGTCAGCGTCTTCACAAAGATCTGCAT 965812
Score = 89.7 bits (98), Expect = 1e-12
Identities = 82/104 (79%), Gaps = 0/104 (0%)
Strand=Plus/Plus
Query 211011 CCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCG 211070
|| ||||||||||||||||| |||||||| ||||||||||| || || |||||
Sbjct 966142 CCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCCGAAGACTCCACCTCC 966201
Query 211071 AGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| ||||| ||||| || || || ||||| ||||| | ||||||
Sbjct 966202 AGGGTGATGGTCTTGCCGGTCAGCGTCTTCACAAAGATCTGCAT 966245
Score = 89.7 bits (98), Expect = 1e-12
Identities = 82/104 (79%), Gaps = 0/104 (0%)
Strand=Plus/Plus
Query 211011 CCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCG 211070
|| ||||||||||||||||| |||||||| ||||||||||| || || |||||
Sbjct 968129 CCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCCGAAGACTCCACCTCC 968188
Query 211071 AGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| ||||| ||||| || || || ||||| ||||| | ||||||
Sbjct 968189 AGGGTGATGGTCTTGCCGGTCAGCGTCTTCACAAAGATCTGCAT 968232
>seq19
Length=1619492
Score = 86.0 bits (94), Expect = 1e-11
Identities = 83/107 (78%), Gaps = 0/107 (0%)
Strand=Plus/Minus
Query 211011 CCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCG 211070
|| ||||||||||| |||||| ||||| || || || ||||||||| || || ||
Sbjct 1128566 CCCTCCTTGTCCTGAATCTTTGCCTTCACATTCTCTATCGTGTCAGAGGACTCCACTTCC 1128507
Query 211071 AGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117
|| || || ||||| ||||| || ||||| ||||| | |||||||||
Sbjct 1128506 AGGGTAATGGTCTTGCCCGTCAGGGTCTTAACAAAAATCTGCATTTT 1128460
>seq47
Length=1007904
Score = 84.2 bits (92), Expect = 5e-11
Identities = 81/104 (78%), Gaps = 0/104 (0%)
Strand=Plus/Plus
Query 211011 CCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCG 211070
|| ||||||||||| ||||| ||||| || ||||||||||| || || ||||||
Sbjct 1003112 CCCTCCTTGTCCTGAATCTTGGCCTTCACATTCTCGATGGTGTCCGAAGACTCCACCTCG 1003171
Query 211071 AGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| ||||| ||||| |||||||| ||||| || || | |||||
Sbjct 1003172 AGGGTGATGGTCTTACCCGTGAGGGTCTTAACGAAGATTTGCAT 1003215
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159116757070145
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |