Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gonium_20pectorale_20[genbank_20GCA_5F001584585.1_202016-03-09] 2,373 sequences; 148,806,073 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq20 136 4e-27 seq19 120 3e-22 seq47 87.8 2e-12 >seq20 Length=1589639 Score = 136 bits (150), Expect = 4e-27 Identities = 102/120 (85%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| ||||| || || | |||||| ||||| |||||||||||||| ||||| ||||| | Sbjct 962733 GCCACCGCGCAGGCGCAGCACCAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCAGC 962792 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 ||| |||||| |||| || ||||||||||||||||| ||||||||||| ||||||| ||| Sbjct 962793 GAGCGTGCGCCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGG 962852 Score = 136 bits (150), Expect = 4e-27 Identities = 102/120 (85%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| ||||| || || | |||||| ||||| |||||||||||||| ||||| ||||| | Sbjct 965380 GCCACCGCGCAGGCGCAGCACCAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCAGC 965439 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 ||| |||||| |||| || ||||||||||||||||| ||||||||||| ||||||| ||| Sbjct 965440 GAGCGTGCGCCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGG 965499 Score = 136 bits (150), Expect = 4e-27 Identities = 102/120 (85%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| ||||| || || | |||||| ||||| |||||||||||||| ||||| ||||| | Sbjct 965813 GCCACCGCGCAGGCGCAGCACCAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCAGC 965872 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 ||| |||||| |||| || ||||||||||||||||| ||||||||||| ||||||| ||| Sbjct 965873 GAGCGTGCGCCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGG 965932 Score = 136 bits (150), Expect = 4e-27 Identities = 102/120 (85%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| ||||| || || | |||||| ||||| |||||||||||||| ||||| ||||| | Sbjct 966246 GCCACCGCGCAGGCGCAGCACCAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCAGC 966305 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 ||| |||||| |||| || ||||||||||||||||| ||||||||||| ||||||| ||| Sbjct 966306 GAGCGTGCGCCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGG 966365 Score = 136 bits (150), Expect = 4e-27 Identities = 102/120 (85%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| ||||| || || | |||||| ||||| |||||||||||||| ||||| ||||| | Sbjct 968233 GCCACCGCGCAGGCGCAGCACCAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCAGC 968292 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 ||| |||||| |||| || ||||||||||||||||| ||||||||||| ||||||| ||| Sbjct 968293 GAGCGTGCGCCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGG 968352 >seq19 Length=1619492 Score = 120 bits (132), Expect = 3e-22 Identities = 98/119 (82%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 ||||| || || || | |||||| || || |||||||||||||| ||||| ||||||| | Sbjct 1128765 CCGCCTCGCAGGCGCAGCACCAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGCG 1128706 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 || |||||| |||| || ||||||||||| ||||| || |||||||| ||||| | ||| Sbjct 1128705 AGCGTGCGCCCGTCCTCCAGCTGCTTGCCCGCGAAGATGAGGCGCTGCTGGTCGGGGGG 1128647 Score = 113 bits (124), Expect = 4e-20 Identities = 91/110 (83%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704 || || | |||||| || || |||||||||||||| ||||| ||||||| ||| |||||| Sbjct 1129596 AGGCGCAGCACCAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGC 1129537 Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 |||| || ||||||||||| ||||| || |||||||| ||||| | ||| Sbjct 1129536 CCGTCCTCCAGCTGCTTGCCCGCGAAGATGAGGCGCTGCTGGTCGGGGGG 1129487 >seq47 Length=1007904 Score = 87.8 bits (96), Expect = 2e-12 Identities = 66/78 (85%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 41673 CCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 41732 ||||||| ||||| ||||||| |||||||| |||| || |||||||||||||| || | Sbjct 1002862 CCTTCTGGATGTTGTAGTCGGCCAGGGTGCGACCGTCCTCCAGCTGCTTGCCGGCAAAGA 1002921 Query 41733 TCAGGCGCTGTTGGTCCG 41750 |||| ||||| ||||||| Sbjct 1002922 TCAGACGCTGCTGGTCCG 1002939 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462290286907600