Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Helicosporidium_20sp._20ATCC_2050920_20[genbank_20GCA_5F000690575.1_
202014-05-13] 5,666 sequences; 12,373,820 total letters
Query= NC_002816.1
Length=123500
Score E
Sequences producing significant alignments: (Bits) Value
seq2724 132 4e-26
seq3257 95.1 1e-14
seq55 95.1 1e-14
>seq2724
Length=1646
Score = 132 bits (146), Expect = 4e-26
Identities = 145/193 (75%), Gaps = 0/193 (0%)
Strand=Plus/Plus
Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204
||||||||| |||||||||||| ||| ||| | || ||||| || || || |||||
Sbjct 1344 CTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGGCCATCCTCCAGCTGCTTGCCCGCGAA 1403
Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264
|||| ||||| ||||||||||| | |||||||||||| || || ||| ||
Sbjct 1404 AATCAGGCGCTGCTGGTCGGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTT 1463
Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324
| | | | ||||| | ||||||||| | ||| || |||||||||||||| ||||| ||
Sbjct 1464 CTCGATGGTGTCCGAAGACTCCACCTCGAGGGTGATGGTCTTGCCCGTCAGCGTCTTGAC 1523
Query 45325 AAAGATTTGCATG 45337
||||| ||||||
Sbjct 1524 GAAGATCTGCATG 1536
>seq3257
Length=1341
Score = 95.1 bits (104), Expect = 1e-14
Identities = 130/182 (71%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||| ||| || || ||||||||| |||||||||||| ||| ||| | || |||
Sbjct 4 ACCAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGGCCATCCTCC 63
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || || || ||||| |||| ||||| ||||||||||| | ||||||||||||
Sbjct 64 AGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCGGGAGGAATGCCCTCCTTGTCCTGG 123
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || ||| || | | ||||| | ||||||||| | ||| || ||||||
Sbjct 124 ATCTTGGCCTTGACGTTTTCAATAGTGTCCGAAGACTCCACCTCGAGGGTGATGGTCTTG 183
Query 45308 CC 45309
||
Sbjct 184 CC 185
>seq55
Length=8980
Score = 95.1 bits (104), Expect = 1e-14
Identities = 96/125 (77%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||| ||| || ||| ||||||||| |||||||||||| ||| ||| |||| |||
Sbjct 4030 ACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCCTCC 4089
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || || |||||||| |||| ||||| ||||| || || | |||||||||||| |
Sbjct 4090 AGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGA 4149
Query 45248 ATTTT 45252
|| ||
Sbjct 4150 ATCTT 4154
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 395047918328986
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |