Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helicosporidium_20sp._20ATCC_2050920_20[genbank_20GCA_5F000690575.1_ 202014-05-13] 5,666 sequences; 12,373,820 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq74 89.7 4e-13 >seq74 Length=8418 Score = 89.7 bits (98), Expect = 4e-13 Identities = 104/138 (75%), Gaps = 2/138 (1%) Strand=Plus/Plus Query 33580 GGCGACAAGTTTGCATCG-TTCACGGCCCAGAAGGGCACGTGCGGCATGATGTACGACCA 33638 |||||||||||||| ||| ||||| || |||||||| |||||| | ||| ||| Sbjct 6366 GGCGACAAGTTTGCCTCGAGACACGG-ACAAAAGGGCACCATCGGCATCACCTACACCCA 6424 Query 33639 GTGGGACATGCCGTTCACGGCCGACGGCGTGGTCCCGGACCTAGTCATCAACCCGCATGC 33698 | ||||||||| || | || | ||| | || || ||||| |||||||||| || || Sbjct 6425 GGAGGACATGCCTTTTTCCGCGCAGGGCATCGTGCCCGACCTCATCATCAACCCCCACGC 6484 Query 33699 GTTCCCCTCGCGCATGAC 33716 |||||||||||||||| Sbjct 6485 CATCCCCTCGCGCATGAC 6502 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356209000511398