Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helicosporidium_20sp._20ATCC_2050920_20[genbank_20GCA_5F000690575.1_ 202014-05-13] 5,666 sequences; 12,373,820 total letters Query= NC_003521.1 Length=241087 Score E Sequences producing significant alignments: (Bits) Value seq1417 89.7 8e-13 >seq1417 Length=2795 Score = 89.7 bits (98), Expect = 8e-13 Identities = 96/127 (76%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 77361 CAGCAGGGTGGAGTAGCACAGGTTGTGGGCCATGATGATGGAGGGGTAGAGGCTGGCGAA 77420 || |||||||| |||||| |||||||||||||| |||||||| ||||| || || || Sbjct 2697 CACCAGGGTGGTGTAGCAGAGGTTGTGGGCCATCATGATGGACGGGTACAGCGAAGCAAA 2638 Query 77421 GTCGAAGACCGCCACGGGGTCGTTGTAGTAGCCCACCACGGGCTCGAAGACGGTGGCACC 77480 ||| | || ||||| | ||||||||| || |||||||| |||||||| || Sbjct 2637 GTCCAGCGTGGCAACGGGCGTGGCGTAGTAGCCGGCCTTGGGCTCGAGCACGGTGGCGCC 2578 Query 77481 CTGGTAG 77487 || |||| Sbjct 2577 CTCGTAG 2571 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 771295769107920