Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helicosporidium_20sp._20ATCC_2050920_20[genbank_20GCA_5F000690575.1_ 202014-05-13] 5,666 sequences; 12,373,820 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq114 86.0 6e-12 >seq114 Length=7431 Score = 86.0 bits (94), Expect = 6e-12 Identities = 114/156 (73%), Gaps = 2/156 (1%) Strand=Plus/Plus Query 153633 GCAATCGACGCCAAGTTGCAAACGGCAGTTTCGTCGGGGGCGCAATATTGTACTATTTCC 153692 || ||||| || | |||||| ||||| || ||||||||||| || | || || || Sbjct 838 GCGATCGAGGCGAGGTTGCACACGGCCGTCTCGTCGGGGGCCGTGTACTCGACGATCTCG 897 Query 153693 GCACACAAATTGCTGCATTTTATCAGGCCGCAATTACT-TTGATTGCTTTTGCGGTTACA 153751 | |||| |||||||| || ||| ||| || | || || ||||| ||| ||| || Sbjct 898 GTGCACAGGTTGCTGCACTTGATCGTGCC-CAGGTTCTGCTGGTTGCTCTTGGCGTTGCA 956 Query 153752 AGCGTCCTTGTATAGCATGTATGGTGTGCCGGTTTC 153787 ||||||||||| |||||||| || ||||| || || Sbjct 957 GGCGTCCTTGTACAGCATGTAGGGCGTGCCCGTCTC 992 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496028866267200