Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helicosporidium_20sp._20ATCC_2050920_20[genbank_20GCA_5F000690575.1_ 202014-05-13] 5,666 sequences; 12,373,820 total letters Query= NC_005261.2 Length=137821 Score E Sequences producing significant alignments: (Bits) Value seq3828 82.4 7e-11 >seq3828 Length=1075 Score = 82.4 bits (90), Expect = 7e-11 Identities = 66/80 (83%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 47348 CGCGCACGAGCGTGGTGAAGCACAGGTTGTGCGCCTGGATGATGCTGGGGTAGAGGCTGG 47407 ||||| ||| ||||||||||| | ||||| | | |||||||||||||||||||||||| Sbjct 390 CGCGCGCGACGGTGGTGAAGCAGATGTTGTACTCTTGGATGATGCTGGGGTAGAGGCTGT 331 Query 47408 CAAAGTCCAGCACCATGACG 47427 ||||||| |||| |||| Sbjct 330 TGAAGTCCAAGACCAAGACG 311 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 440867973314160