Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helicosporidium_20sp._20ATCC_2050920_20[genbank_20GCA_5F000690575.1_ 202014-05-13] 5,666 sequences; 12,373,820 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq5060 123 2e-23 >seq5060 Length=643 Score = 123 bits (136), Expect = 2e-23 Identities = 107/133 (80%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 5623 CTCGAAATCGTTGTGGCCGAAGTTGAACAGCACCACGCCCACGTTGCCGCGGTAGTCGGC 5682 || |||||| |||| || | |||||||||||| ||||||||||||||||||||||| | Sbjct 9 CTTGAAATCTTTGTCGCTGTGGTTGAACAGCACGACGCCCACGTTGCCGCGGTAGTCCTC 68 Query 5683 GTCTATCACGCCCGCGCCCACGTCGATGAAGTGCTTGACCGCCAGGCCGGAGCGGGGAGC 5742 ||| | |||||||||||| | | ||| | ||| || |||||||| || ||||| || Sbjct 69 GTCCACGACGCCCGCGCCCGTGGCAATGCCATTCTTTACAGCCAGGCCAGAACGGGGGGC 128 Query 5743 CACGCGGCCGTAG 5755 ||| ||||||||| Sbjct 129 CACCCGGCCGTAG 141 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430024702862192