Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helicosporidium_20sp._20ATCC_2050920_20[genbank_20GCA_5F000690575.1_ 202014-05-13] 5,666 sequences; 12,373,820 total letters Query= NC_005946.1 Length=105903 Score E Sequences producing significant alignments: (Bits) Value seq74 89.7 3e-13 >seq74 Length=8418 Score = 89.7 bits (98), Expect = 3e-13 Identities = 107/140 (76%), Gaps = 4/140 (3%) Strand=Plus/Minus Query 71418 GGTCATCCTGGAGGGAAAGGCGTGGGGGTTGATGATGAGGTCGGGCACCACCCCGTCCTT 71477 |||||| | ||||| | |||||||||||||||||||||||||||||| | || | | Sbjct 6503 GGTCATGCGCGAGGGGATGGCGTGGGGGTTGATGATGAGGTCGGGCACGATGCCCTGCGC 6444 Query 71478 GTCGAAGGGCATGTCCTCCTGGGT-CAGGACAGCTCCGCATGTCCCCTTTTGCGCCGTGA 71536 | || ||||||||||||||||| ||| | ||| || |||||||| ||||| Sbjct 6443 GGAAAAAGGCATGTCCTCCTGGGTGTAGGTGA-TGCCGATGGTGCCCTTTTG-TCCGTGT 6386 Query 71537 AT-GACGCAAACTTGTCGCC 71555 | || |||||||||||||| Sbjct 6385 CTCGAGGCAAACTTGTCGCC 6366 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338741406808464