Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Helicosporidium_20sp._20ATCC_2050920_20[genbank_20GCA_5F000690575.1_
202014-05-13] 5,666 sequences; 12,373,820 total letters
Query= NC_006151.1
Length=143461
Score E
Sequences producing significant alignments: (Bits) Value
seq416 102 7e-17
>seq416
Length=5185
Score = 102 bits (112), Expect = 7e-17
Identities = 143/196 (73%), Gaps = 5/196 (3%)
Strand=Plus/Minus
Query 94213 GTTCAGCAGCAGCACCCCGCGGCGCGCCCAGGCCTCCAGGCAGCCGTGGGCGGG-CGCGG 94271
||| || |||||||| | ||||||||||||||| || ||| ||||| ||||| |||||
Sbjct 2033 GTTGAGGAGCAGCACGCGCTGGCGCGCCCAGGCCTGCAAGCATCCGTGCGCGGGGCGCGG 1974
Query 94272 GCAGCGTCGGGTACGTCGCCCGGACCGCCGCGAAGATGTTGGCCAGGCTCGGGGGGATCG 94331
||||| | ||| || || ||| | || | |||||| ||| | |||| |
Sbjct 1973 GCAGCC-CAGGT-CGGCGA--GGAGCTCCTTGTGGATGTTTTGCAGCGAGGAAGGGACGG 1918
Query 94332 GCACCCCGCGCCGGACGCTGAAGGCCAGCCCGTGGGCCTGGCCCGGCCCGTGGTACGGGT 94391
| || ||||| ||||| ||||| || || |||||||||| |||||||| ||||
Sbjct 1917 GGACGCCGCGACGGACCGAGAAGGAGAGACCCATGGCCTGGCCCTCGCCGTGGTAGGGGT 1858
Query 94392 CCTGGCCGATGATGAC 94407
||||||||| ||||||
Sbjct 1857 CCTGGCCGAGGATGAC 1842
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 458914695064560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |