Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helicosporidium_20sp._20ATCC_2050920_20[genbank_20GCA_5F000690575.1_ 202014-05-13] 5,666 sequences; 12,373,820 total letters Query= NC_006151.1 Length=143461 Score E Sequences producing significant alignments: (Bits) Value seq416 102 7e-17 >seq416 Length=5185 Score = 102 bits (112), Expect = 7e-17 Identities = 143/196 (73%), Gaps = 5/196 (3%) Strand=Plus/Minus Query 94213 GTTCAGCAGCAGCACCCCGCGGCGCGCCCAGGCCTCCAGGCAGCCGTGGGCGGG-CGCGG 94271 ||| || |||||||| | ||||||||||||||| || ||| ||||| ||||| ||||| Sbjct 2033 GTTGAGGAGCAGCACGCGCTGGCGCGCCCAGGCCTGCAAGCATCCGTGCGCGGGGCGCGG 1974 Query 94272 GCAGCGTCGGGTACGTCGCCCGGACCGCCGCGAAGATGTTGGCCAGGCTCGGGGGGATCG 94331 ||||| | ||| || || ||| | || | |||||| ||| | |||| | Sbjct 1973 GCAGCC-CAGGT-CGGCGA--GGAGCTCCTTGTGGATGTTTTGCAGCGAGGAAGGGACGG 1918 Query 94332 GCACCCCGCGCCGGACGCTGAAGGCCAGCCCGTGGGCCTGGCCCGGCCCGTGGTACGGGT 94391 | || ||||| ||||| ||||| || || |||||||||| |||||||| |||| Sbjct 1917 GGACGCCGCGACGGACCGAGAAGGAGAGACCCATGGCCTGGCCCTCGCCGTGGTAGGGGT 1858 Query 94392 CCTGGCCGATGATGAC 94407 ||||||||| |||||| Sbjct 1857 CCTGGCCGAGGATGAC 1842 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 458914695064560