Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helicosporidium_20sp._20ATCC_2050920_20[genbank_20GCA_5F000690575.1_ 202014-05-13] 5,666 sequences; 12,373,820 total letters Query= NC_006273.2 Length=235646 Score E Sequences producing significant alignments: (Bits) Value seq1417 102 1e-16 >seq1417 Length=2795 Score = 102 bits (112), Expect = 1e-16 Identities = 98/126 (78%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 79712 CAGCAGGGTGGAGTAGCAGAGGTTGTGAGCCATGATGATGGAAGGGTAGAGGCTGGCAAA 79771 || |||||||| ||||||||||||||| ||||| |||||||| ||||| || ||||| Sbjct 2697 CACCAGGGTGGTGTAGCAGAGGTTGTGGGCCATCATGATGGACGGGTACAGCGAAGCAAA 2638 Query 79772 GTCGAACACGGCCACGGGGTCGTTGTAGTAACCCACCTCGGGCTCAAACACCGTGGCGCC 79831 ||| | | ||| ||||| | |||||| || ||| |||||| | ||| |||||||| Sbjct 2637 GTCCAGCGTGGCAACGGGCGTGGCGTAGTAGCCGGCCTTGGGCTCGAGCACGGTGGCGCC 2578 Query 79832 CTGGTA 79837 || ||| Sbjct 2577 CTCGTA 2572 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 753885802256160