Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Helicosporidium_20sp._20ATCC_2050920_20[genbank_20GCA_5F000690575.1_
202014-05-13] 5,666 sequences; 12,373,820 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq1781 96.9 5e-16
>seq1781
Length=2386
Score = 96.9 bits (106), Expect = 5e-16
Identities = 119/163 (73%), Gaps = 0/163 (0%)
Strand=Plus/Plus
Query 16453 TCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGG 16512
||| || ||||||||||| || ||||||||||| || ||||| ||||| ||||| |||||
Sbjct 613 TCTGCGCGATAACATCCAGGGCATCACCAAGCCCGCCATCCGCCGTCTCGCTCGCCGTGG 672
Query 16513 TGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTT 16572
|| ||||||||| || || | |||| || ||| ||||| || | ||| | ||
Sbjct 673 CGGTGTCAAGCGTATCAGCGGCCTCATCTACGAGGAGTCTCGTGGCGTGCTCAAGGTGTT 732
Query 16573 CCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCAC 16615
||| ||| | || ||| || || | ||| |||||||||
Sbjct 733 CCTGGAGAACATTGTCCGCGACGCCGTGACCTACACCGAGCAC 775
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79070019536538
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |