Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helicosporidium_20sp._20ATCC_2050920_20[genbank_20GCA_5F000690575.1_ 202014-05-13] 5,666 sequences; 12,373,820 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq1781 96.9 5e-16 >seq1781 Length=2386 Score = 96.9 bits (106), Expect = 5e-16 Identities = 119/163 (73%), Gaps = 0/163 (0%) Strand=Plus/Plus Query 16453 TCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGG 16512 ||| || ||||||||||| || ||||||||||| || ||||| ||||| ||||| ||||| Sbjct 613 TCTGCGCGATAACATCCAGGGCATCACCAAGCCCGCCATCCGCCGTCTCGCTCGCCGTGG 672 Query 16513 TGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTT 16572 || ||||||||| || || | |||| || ||| ||||| || | ||| | || Sbjct 673 CGGTGTCAAGCGTATCAGCGGCCTCATCTACGAGGAGTCTCGTGGCGTGCTCAAGGTGTT 732 Query 16573 CCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCAC 16615 ||| ||| | || ||| || || | ||| ||||||||| Sbjct 733 CCTGGAGAACATTGTCCGCGACGCCGTGACCTACACCGAGCAC 775 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79070019536538