Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Helicosporidium_20sp._20ATCC_2050920_20[genbank_20GCA_5F000690575.1_
202014-05-13] 5,666 sequences; 12,373,820 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq114 250 6e-61
>seq114
Length=7431
Score = 250 bits (276), Expect = 6e-61
Identities = 580/869 (67%), Gaps = 4/869 (0%)
Strand=Plus/Minus
Query 363445 GTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTT 363504
|| || || |||||||| ||| | ||||| || | || || ||||| ||| ||
Sbjct 1697 GTGGAGCGTCCGCAGCACATGCTGATGCGCGTGTCGATGGGCATCCACAAGGAGGACGTG 1638
Query 363505 GATGCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGTGTATTCACGCACGCCACGCCA 363564
|| | ||||| || || || | || || || ||| ||||||||||| ||||
Sbjct 1637 GAGTCGGCGATCGAGACGTACCACCTGCTGAGCCAGCGTTGGTTCACGCACGCGTCGCCG 1578
Query 363565 ACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATG 363624
|| | | ||| || || || | || ||| || |||||| | | |||
Sbjct 1577 ACGCTCTTCAACGCGGGCACCCCCCGCCCGCAGCTGAGCAGCTGCTTTTTGGTGGCCATG 1518
Query 363625 AAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAG 363684
|||| ||| ||||||||| |||| ||||| || ||| | || || || ||||
Sbjct 1517 AAGGGCGACAGCATCGAGGGCATCTACGACACGCTCAAGGAGTGCGCGGCCATCAGCAAG 1458
Query 363685 AATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAACAGTTACATTCG 363743
| || ||||| || || | || ||| | | || || || | || |||| ||
Sbjct 1457 AGCGCGGGCGGCATCGGGCTGCACATGCACGACATCCGCGCCACGGGGTCGT-ACATCCG 1399
Query 363744 CGGCACAGGGGGATACTCGAATGGGC-TGGTTCCCATGCTTCGTGTGTTTGACAATACTG 363802
||||| || || | | ||| |||| |||||||| || ||||| || | || |
Sbjct 1398 GGGCACCAACGGC-ACGAGCAACGGCGTGGTGCCCATGCTGCGCGTGTTCAACGACACGG 1340
Query 363803 CGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGC 363862
| ||||||| |||||||| || || |||||||| || || ||||| |||| || ||||
Sbjct 1339 CTCGGTACGTGGACCAGGGCGGCGGCAAGCGCAAGGGCGCCTTTGCGGTGTACCTGGAGC 1280
Query 363863 CTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAAT 363922
| || || || | | || | || || || || || ||| || || |||||
Sbjct 1279 CCTGGCACGCGGACGTGATGGACTGGCTGGACCTGCGCAAGAACCACGGCAAGGAGGAGG 1220
Query 363923 TGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGG 363982
|| || || || |||||||| | || ||| | | |||| |||||||||||||| |
Sbjct 1219 CTCGCGCCCGCGACCTGTTCTACGGGCTGTGGATCCCCGACCTGTTTATGAAGCGCGTCG 1160
Query 363983 AGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTAT 364042
|||| | | | ||| || || ||||| |||| || || || | || || |
Sbjct 1159 AGGCGGACGGGCAGTGGAGCCTGTTCTGCCCCAACGAGGCGCCGGGCCTGGCGGACGTGT 1100
Query 364043 GGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGA 364102
|||| ||| | || | || |||| ||| || ||||| || || ||||
Sbjct 1099 GGGGCCCCGAGTTTGAGTCGCTCTACGCGCGGTACGAGCGCGAGGGCCGCGCGCGCAAGA 1040
Query 364103 CAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACAC 364162
| || | ||| ||| |||| ||||| ||||| |||| |||||| ||||| || || |
Sbjct 1039 CGATGCGCGCGCAGCAGCTGTGGTTCGCCATTTTGGAGGCGCAGACGGAGACGGGCACGC 980
Query 364163 CCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAA 364222
|||| ||| ||||||| || | |||||| |||| |||||||||| |||| || || |
Sbjct 979 CCTACATGCTGTACAAGGACGCCTGCAACGCCAAGAGCAACCAGCAGAACCTGGGCACGA 920
Query 364223 TTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCG 364282
| || |||||||| || |||||||| | || ||||| || ||||||||||| ||||
Sbjct 919 TCAAGTGCAGCAACCTGTGCACCGAGATCGTCGAGTACACGGCCCCCGACGAGACGGCCG 860
Query 364283 TATGTAACCTTGCGTCGATCGCGCTTCCG 364311
| || ||||| || ||||||||||| |||
Sbjct 859 TGTGCAACCTCGCCTCGATCGCGCTGCCG 831
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303258982230812
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |