Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Helicosporidium_20sp._20ATCC_2050920_20[genbank_20GCA_5F000690575.1_
202014-05-13] 5,666 sequences; 12,373,820 total letters
Query= NC_007383.1
Length=134394
Score E
Sequences producing significant alignments: (Bits) Value
seq2724 84.2 2e-11
>seq2724
Length=1646
Score = 84.2 bits (92), Expect = 2e-11
Identities = 141/204 (69%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
||||| | || || || || | || || || | || ||| |||| || ||| |
Sbjct 1535 ATGCAGATCTTCGTCAAGACGCTGACGGGCAAGACCATCACCCTCGAGGTGGAGTCTTCG 1476
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
|||||||||||| | ||||| ||||| ||||| || ||||| |||||||| ||
Sbjct 1475 GACACCATCGAGAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCCGACCAG 1416
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170
||| | ||||||| || |||||||| || || |||| | | | | ||| || |||
Sbjct 1415 CAGCGCCTGATTTTCGCGGGCAAGCAGCTGGAGGATGGCCGCACTCTGTCCGACTACAAC 1356
Query 24171 ATTCAAAAAGAATCTACAATTCAT 24194
|| || || || ||||| |||||
Sbjct 1355 ATCCAGAAGGAGTCTACCCTTCAT 1332
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429906311038230
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |